Predicting enzyme class from protein structure using Bayesian classification. LC Borro, SRM Oliveira, MEB Yamagishi, AL Mancini, JG Jardine, ... Genetics and Molecular Research, v. 5, n. 1, p. 193-202, 2006., 2006 | 66 | 2006 |
The Star STING server: a multiplatform environment for protein structure analysis. G Neshich, I Mazoni, SRM Oliveira, MEB Yamagishi, PR Kuser-Falcao, ... Genetics and Molecular Research, v. 5, n. 4, p. 717-722, 2006., 2006 | 31 | 2006 |
Improving predictions of protein-protein interfaces by combining amino acid-specific classifiers based on structural and physicochemical descriptors with their weighted … FR de Moraes, IAP Neshich, I Mazoni, IH Yano, JGC Pereira, JA Salim, ... Plos one 9 (1), e87107, 2014 | 12 | 2014 |
Analysis of binding properties and specificity through identification of the interface forming residues (IFR) for serine proteases in silico docked to different inhibitors C Ribeiro, RC Togawa, IAP Neshich, I Mazoni, AL Mancini, RCM Minardi, ... BMC Structural Biology 10, 1-16, 2010 | 10 | 2010 |
Computational biology tools for identifying specific ligand binding residues for novel agrochemical and drug design I Agostinho Pena Neshich, L Nishimura, F Rogerio de Moraes, ... Current Protein and Peptide Science 16 (8), 701-717, 2015 | 9 | 2015 |
Using Structural and Physical–Chemical Parameters to Identify, Classify, and Predict Functional Districts in Proteins—The Role of Electrostatic Potential G Neshich, IA Pena Neshich, F Moraes, JA Salim, L Borro, IH Yano, ... Computational Electrostatics for Biological Applications: Geometric and …, 2015 | 6 | 2015 |
PDB-Metrics: a web tool for exploring the PDB contents. R Fileto, PR Kuser, MEB Yamagishi, AA Ribeiro, TG Quinalia, EH Franco, ... Genetics and Molecular Research, v. 5, n. 2, p. 333-341, 2006., 2006 | 5 | 2006 |
Building multiple sequence alignments with a flavor of HSSP alignments. RH Higa, SAB da Cruz, PR Kuser, MEB Yamagishi, R Fileto, ... Genetics and Molecular Research, v. 5, n. 1, p. 127-137, 2006., 2006 | 4 | 2006 |
Study of specific nanoenvironments containing α-helices in all-α and (α+ β)+(α/β) proteins I Mazoni, LC Borro, JG Jardine, IH Yano, JA Salim, G Neshich PloS one 13 (7), e0200018, 2018 | 3 | 2018 |
Biologia computacional molecular e suas aplicações na agricultura. JG Jardine, IAP Neshich, I Mazoni, IH Yano, FR de Moraes, JA Salim, ... In: MASSRUHÁ, SMFS; LEITE, MA de A.; LUCHIARI JUNIOR, A.; ROMANI, LAS (Ed …, 2014 | 3 | 2014 |
Mechanisms of protein stabilization at very low pH F Duarte, R Sepulveda, R Araya, S Flores, T Perez-Acle, W Gonzales, ... Proc. 19th International Biohydrometallurgy Symposium, Changsha, China, 349-353, 2011 | 3 | 2011 |
A comparison between internal protein nanoenvironments of α-helices and β-sheets I Mazoni, JA Salim, FR de Moraes, L Borro, G Neshich Plos one 15 (12), e0244315, 2020 | 2 | 2020 |
Binding affinity prediction using a nonparametric regression model based on physicochemical and structural descriptors of the nano-environment for protein-ligand interactions. L Borro, IH YANO, I Mazoni, G Neshich In: STRUCTURAL BIOINFORMATICS AND COMPUTATIONAL BIOPHYSICS, 2016, Orlando …, 2016 | 2 | 2016 |
Identificando Pockets na superfície protéica usando o Java Protein Dossier-JPD. MEB Yamagishi, PRK Falcão, RH Higa, EH dos Santos, JG Jardine, ... Campinas: Embrapa Informática Agropecuária, 2005., 2005 | 2 | 2005 |
Análise do nano-ambiente propício para nucleação e manutenção dos elementos da estrutura secundária no contexto estrutural das proteínas funcionais I Mazoni PhD Thesis. Campinas: UNICAMP, Instituto de Biologia, 2018 | 1 | 2018 |
Uma metodologia para seleção de parâmetros em modelos de classificação de proteínas. SRM OLIVEIRA, MEB Yamagishi, LC Borro, PRK Falcão, ... Campinas: Embrapa Informática Agropecuária, 2006., 2006 | 1 | 2006 |
Comprehensive analysis of the distinct nano environments characteristics containing the different secondary structure elements: α-helices, β-sheets, and turns I Mazoni, JA Salim, FR Moraes, JL Correa, L Borro, G Neshich | | 2023 |
DIPN: a dictionary of the internal proteins nanoenvironments and their potential for transformation into agricultural assets. I Mazoni, G Neshich In: MASSRUHÁ, SMFS; LEITE, MA de A.; OLIVEIRA, SR de M.; MEIRA, CAA …, 2023 | | 2023 |
Interactions between tanshinones and derivatives with PAI-1, a possible new class of anticoagulants. RV dos SANTOS, I MAZONI, L TASIC In: REUNIÃO ANUAL DA SBQ, 45., 2022, Maceió. Química para o desenvolvimento …, 2022 | | 2022 |
DPIN: um dicionário dos nanoambientes internos das proteínas e seu potencial para transformação em ativos para a agricultura. I MAZONI, G NESHICH In: MASSRUHÁ, SMFS; LEITE, MA de A.; OLIVEIRA, SR de M.; MEIRA, CAA …, 2020 | | 2020 |