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Alex Pollen
Alex Pollen
Verified email at ucsf.edu - Homepage
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Year
The genomic basis of adaptive evolution in threespine sticklebacks
FC Jones, MG Grabherr, YF Chan, P Russell, E Mauceli, J Johnson, ...
Nature 484 (7392), 55-61, 2012
18202012
Low-coverage single-cell mRNA sequencing reveals cellular heterogeneity and activated signaling pathways in developing cerebral cortex
AA Pollen, TJ Nowakowski, J Shuga, X Wang, AA Leyrat, JH Lui, N Li, ...
Nature biotechnology 32 (10), 1053-1058, 2014
9442014
Spatiotemporal gene expression trajectories reveal developmental hierarchies of the human cortex
TJ Nowakowski, A Bhaduri, AA Pollen, B Alvarado, MA Mostajo-Radji, ...
Science 358 (6368), 1318-1323, 2017
7842017
Molecular identity of human outer radial glia during cortical development
AA Pollen, TJ Nowakowski, J Chen, H Retallack, C Sandoval-Espinosa, ...
Cell 163 (1), 55-67, 2015
7842015
Expression analysis highlights AXL as a candidate Zika virus entry receptor in neural stem cells
TJ Nowakowski, AA Pollen, E Di Lullo, C Sandoval-Espinosa, ...
Cell stem cell 18 (5), 591-596, 2016
6062016
Human-specific loss of regulatory DNA and the evolution of human-specific traits
CY McLean, PL Reno, AA Pollen, AI Bassan, TD Capellini, C Guenther, ...
Nature 471 (7337), 216-219, 2011
5582011
Zika virus cell tropism in the developing human brain and inhibition by azithromycin
H Retallack, E Di Lullo, C Arias, KA Knopp, MT Laurie, ...
Proceedings of the National Academy of Sciences 113 (50), 14408-14413, 2016
5452016
Human iPSC-derived cerebral organoids model cellular features of lissencephaly and reveal prolonged mitosis of outer radial glia
M Bershteyn, TJ Nowakowski, AA Pollen, E Di Lullo, A Nene, ...
Cell stem cell 20 (4), 435-449. e4, 2017
5142017
Human-specific NOTCH2NL genes affect notch signaling and cortical neurogenesis
IT Fiddes, GA Lodewijk, M Mooring, CM Bosworth, AD Ewing, ...
Cell 173 (6), 1356-1369. e22, 2018
4632018
Establishing cerebral organoids as models of human-specific brain evolution
AA Pollen, A Bhaduri, MG Andrews, TJ Nowakowski, OS Meyerson, ...
Cell 176 (4), 743-756. e17, 2019
4522019
Cell stress in cortical organoids impairs molecular subtype specification
A Bhaduri, MG Andrews, W Mancia Leon, D Jung, D Shin, D Allen, D Jung, ...
Nature 578 (7793), 142-148, 2020
4302020
cis-Regulatory changes in Kit ligand expression and parallel evolution of pigmentation in sticklebacks and humans
CT Miller, S Beleza, AA Pollen, D Schluter, RA Kittles, MD Shriver, ...
Cell 131 (6), 1179-1189, 2007
3982007
High-resolution comparative analysis of great ape genomes
ZN Kronenberg, IT Fiddes, D Gordon, S Murali, S Cantsilieris, ...
Science 360 (6393), eaar6343, 2018
3632018
Single-cell analysis of long non-coding RNAs in the developing human neocortex
SJ Liu, TJ Nowakowski, AA Pollen, JH Lui, MA Horlbeck, FJ Attenello, ...
Genome biology 17, 1-17, 2016
3612016
Environmental complexity and social organization sculpt the brain in Lake Tanganyikan cichlid fish
AA Pollen, AP Dobberfuhl, J Scace, MM Igulu, SCP Renn, CA Shumway, ...
Brain, Behavior and Evolution 70 (1), 21-39, 2007
3152007
Transformation of the radial glia scaffold demarcates two stages of human cerebral cortex development
TJ Nowakowski, AA Pollen, C Sandoval-Espinosa, AR Kriegstein
Neuron 91 (6), 1219-1227, 2016
2942016
Radial glia require PDGFD–PDGFRβ signalling in human but not mouse neocortex
JH Lui, TJ Nowakowski, AA Pollen, A Javaherian, AR Kriegstein, ...
Nature 515 (7526), 264-268, 2014
1682014
Comparative aspects of cortical neurogenesis in vertebrates
AFP Cheung, AA Pollen, A Tavare, J DeProto, Z Molnár
Journal of anatomy 211 (2), 164-176, 2007
1492007
Regulation of cell-type-specific transcriptomes by microRNA networks during human brain development
TJ Nowakowski, N Rani, M Golkaram, HR Zhou, B Alvarado, K Huch, ...
Nature neuroscience 21 (12), 1784-1792, 2018
1452018
UCSC Cell Browser: visualize your single-cell data
ML Speir, A Bhaduri, NS Markov, P Moreno, TJ Nowakowski, ...
Bioinformatics 37 (23), 4578-4580, 2021
1302021
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