Reinforcement learning based adaptive sampling: REAPing rewards by exploring protein conformational landscapes Z Shamsi, KJ Cheng, D Shukla The Journal of Physical Chemistry B 122 (35), 8386-8395, 2018 | 88 | 2018 |
Universality of the sodium ion binding mechanism in class AG‐protein‐coupled receptors B Selvam, Z Shamsi, D Shukla Angewandte Chemie 130 (12), 3102-3107, 2018 | 48 | 2018 |
Enhanced unbiased sampling of protein dynamics using evolutionary coupling information Z Shamsi, AS Moffett, D Shukla Scientific reports 7 (1), 12700, 2017 | 44 | 2017 |
Preconcentration of morphine and codeine using a magnetite/reduced graphene oxide/silver nano-composite and their determination by high-performance liquid chromatography H Abdolmohammad-Zadeh, A Zamani, Z Shamsi Journal of Chromatography A 1590, 2-9, 2019 | 31 | 2019 |
A simple magnetic solid-phase extraction method based on magnetite/graphene oxide nanocomposite for pre-concentration and determination of melamine by high-performance liquid … H Abdolmohammad-Zadeh, A Zamani, Z Shamsi Environmental Science and Pollution Research 27 (9), 9826-9834, 2020 | 24 | 2020 |
TLmutation: predicting the effects of mutations using transfer learning Z Shamsi, M Chan, D Shukla The Journal of Physical Chemistry B 124 (19), 3845-3854, 2020 | 22 | 2020 |
Determination of bisphenol-A in plastic bottled water in markets of Zanjan, Iran M Parto, J Aazami, Z Shamsi, A Zamani, M Savabieasfahani International Journal of Environmental Science and Technology 19 (4), 3337-3344, 2022 | 17 | 2022 |
Extraction of four endocrine-disrupting chemicals using a Fe3O4/graphene oxide/di-(2-ethylhexyl) phosphoric acid nano-composite, and their quantification by HPLC-UV H Abdolmohammad-Zadeh, A Zamani, Z Shamsi Microchemical Journal 157, 104964, 2020 | 14 | 2020 |
Application of Hidden Markov Models in Biomolecular Simulations S Shukla, Z Shamsi, AS Moffett, B Selvam, D Shukla Methods in Molecular Biology, 2016 | 10 | 2016 |
Wastewater treatment by using polyurethane foams modified with Bis-[2-ethylhexyl] phosphoric acid: kinetics, equilibrium and desorption studies Z Shamsi, MR Yaftian, AH Parizanganeh, AA Zamani Journal of Human Environment and Health Promotion 3 (1), 28-37, 2017 | 6 | 2017 |
Spatial variability and pollution status of lead and nickel the street Dust of Zanjan City, Iran M Shamsi, A Zamani, Y Khosravi, A Parizanganeh, Z Shamsi Journal of Human Environment and Health Promotion 6 (1), 11-18, 2020 | 5 | 2020 |
How does evolution design functional free energy landscapes of proteins? A case study on the emergence of regulation in the Cyclin Dependent Kinase family Z Shamsi, D Shukla Molecular Systems Design & Engineering 5 (1), 392-400, 2020 | 3 | 2020 |
Automated Deep Aberration Detection from Chromosome Karyotype Images. Z Shamsi, D Bryant, J Wilson, X Qu, A Dubey, K Kothari, M Dehghani, ... URL: http://arxiv. org/abs/2211.14312, 2022 | 1 | 2022 |
Magnetic adsorbent based on the electric arc furnace dust for the removal of methylene blue dye from aqueous solution Z Shamsi, Z Mohamadi, A Zamani, A Alizadeh Environmental Progress & Sustainable Energy 40 (5), e13636, 2021 | 1 | 2021 |
Publisher Correction: Enhanced unbiased sampling of protein dynamics using evolutionary coupling information Z Shamsi, AS Moffett, D Shukla Scientific Reports 7 (1), 18102, 2017 | 1 | 2017 |
Controller Design for Processes with Unknown Dynamics and Input Nonlinearity with Applications to Bioreactors Z Shamsi, M Shahrokhi Industrial & Engineering Chemistry Research 55 (9), 2584-2593, 2016 | 1 | 2016 |
SKIN SHRIMP TO USED IN THE REMOVAL OF URANIUM AND THORIUM FROM CONTAMINATED AQUEOUS SOLUTIONS Z SHAMSI, A ZAMANI, ZAH PARI THE APPLICATION OF CHEMISTRY IN ENVIRONMENT 4 (16), 1-11, 2013 | 1 | 2013 |
NPSV-deep: a deep learning method for genotyping structural variants in short read genome sequencing data MD Linderman, J Wallace, A van der Heyde, E Wieman, D Brey, Y Shi, ... Bioinformatics, btae129, 2024 | | 2024 |
42. Automated deep aberration detection from chromosome karyotype images M Fang, Z Shamsi, D Bryant, J Wilson, X Qu, A Dubey, K Kothari, ... Cancer Genetics 278, 13, 2023 | | 2023 |
Billion-years old proteins show the importance of N-lobe orientation in Imatinib-kinase selectivity Z Shamsi, D Shukla arXiv preprint arXiv:2303.15586, 2023 | | 2023 |