| Comparative transcriptome analyses reveal core parasitism genes and suggest gene duplication and repurposing as sources of structural novelty Z Yang, EK Wafula, LA Honaas, H Zhang, M Das, M Fernandez-Aparicio, ... Molecular biology and evolution 32 (3), 767-790, 2015 | 147 | 2015 |
| Horizontal gene transfer is more frequent with increased heterotrophy and contributes to parasite adaptation Z Yang, Y Zhang, EK Wafula, LA Honaas, PE Ralph, S Jones, CR Clarke, ... Proceedings of the National Academy of Sciences 113 (45), E7010-E7019, 2016 | 94 | 2016 |
| Convergent horizontal gene transfer and cross-talk of mobile nucleic acids in parasitic plants Z Yang, EK Wafula, G Kim, S Shahid, JR McNeal, PE Ralph, PR Timilsena, ... Nature Plants 5 (9), 991-1001, 2019 | 76 | 2019 |
| Natural variation of C‐repeat‐binding factor (CBF s) genes is a major cause of divergence in freezing tolerance among a group of Arabidopsis thaliana populations along the … J Kang, H Zhang, T Sun, Y Shi, J Wang, B Zhang, Z Wang, Y Zhou, H Gu New Phytologist 199 (4), 1069-1080, 2013 | 71 | 2013 |
| A phased, chromosome-scale genome of ‘Honeycrisp’ apple (Malus domestica) A Khan, SB Carey, A Serrano, H Zhang, H Hargarten, H Hale, A Harkess, ... Gigabyte 2022, 2022 | 11 | 2022 |
| Building a foundation for gene family analysis in Rosaceae genomes with a novel workflow: a case study in Pyrus architecture genes H Zhang, EK Wafula, J Eilers, A Harkess, PE Ralph, PR Timilsena, ... Frontiers in Plant Science, 3974, 2022 | 10 | 2022 |
| PlantTribes2: Tools for comparative gene family analysis in plant genomics EK Wafula, H Zhang, G Von Kuster, JH Leebens-Mack, LA Honaas, ... Frontiers in Plant Science 13, 1011199, 2023 | 7 | 2023 |
| Risk versus reward: host dependent parasite mortality rates and phenotypes in the facultative generalist Triphysaria versicolor LA Honaas, S Jones, N Farrell, W Kamerow, H Zhang, K Vescio, ... BMC plant biology 19, 1-12, 2019 | 3 | 2019 |
| Transcriptomic approach to uncover dynamic events in the development of mid-season sunburn in apple fruit JM Waite, EA Kelly, H Zhang, HL Hargarten, S Waliullah, NS Altman, ... G3: Genes, Genomes, Genetics 13 (8), jkad120, 2023 | 2 | 2023 |
| A chromosome-scale assembly for ‘d’Anjou’pear A Yocca, M Akinyuwa, N Bailey, B Cliver, H Estes, A Guillemette, ... G3: Genes, Genomes, Genetics 14 (3), jkae003, 2024 | 1 | 2024 |
| Towards identification of postharvest fruit quality transcriptomic markers in Malus domestica JA Hadish, HL Hargarten, H Zhang, JP Mattheis, LA Honaas, SP Ficklin Plos one 19 (3), e0297015, 2024 | | 2024 |
| Rating Pome Fruit Quality Traits Using Deep Learning and Image Processing NH Nguyen, J Michaud, R Mogollon, H Zhang, H Hargarten, R Leisso, ... bioRxiv, 2024.04. 03.588000, 2024 | | 2024 |
| A Phased, Chromosome-scale Genome for Malus domestica'WA 38' H Zhang, A Eaker, I Ko, S Haney, N Khuu, K Ryan, A Appleby, ... bioRxiv, 2024.01. 10.574953, 2024 | | 2024 |
| Quantifying Superficial Scald in Granny Smith Apple Using a Deep Convolutional Neural Network and Computer Vision Techniques N Nguyen, J Michaud, H Hargarten, R Leisso, SP Ficklin, L Honaas, ... 2023 ASHS Annual Conference, 2023 | | 2023 |
| Towards a catalog of pome tree architecture genes: the draft ‘d’Anjou’genome (Pyrus communis L.) 2 LA Honaas Plant and Animal Genome XXIX Conference (January 8-12, 2022), 2022 | | 2022 |
| What Makes an Apple Go Bad? Using Functional Genomics for Fruit Quality Risk Assessment H Hargarten, H Zhang, JA Hadish, TD Biggs, J Mattheis, SP Ficklin, ... Plant and Animal Genome XXIX Conference (January 8-12, 2022), 0 | | |
Loren HonaasUSDA ARSVerified email at usda.gov
