Emma B Hodcroft
Emma B Hodcroft
Post-doctoral Researcher, University of Bern
Verified email at unibas.ch - Homepage
Cited by
Cited by
COVID-19 epidemic in Switzerland: on the importance of testing, contact tracing and isolation
M Salathé, CL Althaus, R Neher, S Stringhini, E Hodcroft, J Fellay, ...
Swiss medical weekly 150 (1112), 2020
Automated analysis of phylogenetic clusters
M Ragonnet-Cronin, E Hodcroft, S Hué, E Fearnhill, V Delpech, ...
BMC bioinformatics 14 (1), 1-10, 2013
Potential impact of seasonal forcing on a SARS-CoV-2 pandemic
RA Neher, R Dyrdak, V Druelle, EB Hodcroft, J Albert
Swiss medical weekly 150 (1112), 2020
Coast-to-coast spread of SARS-CoV-2 during the early epidemic in the United States
JR Fauver, ME Petrone, EB Hodcroft, K Shioda, HY Ehrlich, AG Watts, ...
Cell 181 (5), 990-996. e5, 2020
Cryptic transmission of SARS-CoV-2 in Washington state
T Bedford, AL Greninger, P Roychoudhury, LM Starita, M Famulare, ...
Science 370 (6516), 571-575, 2020
Scientific consensus on the COVID-19 pandemic: we need to act now
NA Alwan, RA Burgess, S Ashworth, R Beale, N Bhadelia, D Bogaert, ...
The Lancet 396 (10260), e71-e72, 2020
Phylogenetic tools for generalized HIV-1 epidemics: findings from the PANGEA-HIV methods comparison
O Ratmann, EB Hodcroft, M Pickles, A Cori, M Hall, S Lycett, C Colijn, ...
Molecular biology and evolution 34 (1), 185-203, 2017
Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020
E Alm, EK Broberg, T Connor, EB Hodcroft, AB Komissarov, ...
Eurosurveillance 25 (32), 2001410, 2020
Identifying transmission clusters with cluster picker and HIV-TRACE
R Rose, SL Lamers, JJ Dollar, MK Grabowski, EB Hodcroft, ...
AIDS research and human retroviruses 33 (3), 211-218, 2017
Preliminary case report on the SARS-CoV-2 cluster in the UK, France, and Spain
EB Hodcroft
Preprints, 2020
The contribution of viral genotype to plasma viral set-point in HIV infection
E Hodcroft, JD Hadfield, E Fearnhill, A Phillips, D Dunn, S O'Shea, ...
PLoS Pathog 10 (5), e1004112, 2014
Transmission of non-B HIV subtypes in the United Kingdom is increasingly driven by large non-heterosexual transmission clusters
M Ragonnet-Cronin, SJ Lycett, EB Hodcroft, S Hué, E Fearnhill, AE Brown, ...
The Journal of infectious diseases 213 (9), 1410-1418, 2016
Emergence and spread of a SARS-CoV-2 variant through Europe in the summer of 2020
EB Hodcroft, M Zuber, S Nadeau, KHD Crawford, JD Bloom, D Veesler, ...
MedRxiv, 2020
Non-disclosed men who have sex with men in UK HIV transmission networks: phylogenetic analysis of surveillance data
M Ragonnet-Cronin, S Hué, EB Hodcroft, A Tostevin, D Dunn, T Fawcett, ...
The lancet HIV 5 (6), e309-e316, 2018
Genetic Variants of SARS-CoV-2—What Do They Mean?
AS Lauring, EB Hodcroft
JAMA, 2021
Using nearly full-genome HIV sequence data improves phylogeny reconstruction in a simulated epidemic
G Yebra, EB Hodcroft, ML Ragonnet-Cronin, D Pillay, AJL Brown, ...
Scientific reports 6 (1), 1-6, 2016
Genomic analysis of nCoV spread
T Bedford, R Neher, J Hadfield, E Hodcroft, M Ilcisin, N Müller
Situation report 2020-01-30. 2020. https://nextstrain. org/narratives/ncov …, 2020
TreeCollapserCL 4
E Hodcroft
URL http://emmahodcroft. com/TreeCollapseCL. html, 2013
Year-letter genetic clade naming for SARS-CoV-2 on Nextstain. org
EB Hodcroft, J Hadfield, RA Neher, T Bedford
Nextstrainorg. June 2, 2020
Comparing viral load and clinical outcomes in Washington State across D614G mutation in spike protein of SARS-CoV-2
C Wagner, P Roychoudhury, J Hadfield, E Hodcroft, J Lee, L Moncla, ...
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