| QIIME allows analysis of high-throughput community sequencing data JG Caporaso, J Kuczynski, J Stombaugh, K Bittinger, FD Bushman, ... Nature methods 7 (5), 335, 2010 | 18434 | 2010 |
| UCHIME improves sensitivity and speed of chimera detection RC Edgar, BJ Haas, JC Clemente, C Quince, R Knight Bioinformatics 27 (16), 2194-2200, 2011 | 7555 | 2011 |
| A core gut microbiome in obese and lean twins PJ Turnbaugh, M Hamady, T Yatsunenko, BL Cantarel, A Duncan, RE Ley, ... nature 457 (7228), 480-484, 2009 | 5834 | 2009 |
| Structure, function and diversity of the healthy human microbiome C Huttenhower, D Gevers, R Knight, S Abubucker, JH Badger, ... nature 486 (7402), 207, 2012 | 4954 | 2012 |
| UniFrac: a new phylogenetic method for comparing microbial communities C Lozupone, R Knight Appl. Environ. Microbiol. 71 (12), 8228-8235, 2005 | 4747 | 2005 |
| Obesity alters gut microbial ecology RE Ley, F Bäckhed, P Turnbaugh, CA Lozupone, RD Knight, JI Gordon Proceedings of the National Academy of Sciences 102 (31), 11070-11075, 2005 | 4538 | 2005 |
| Human gut microbiome viewed across age and geography T Yatsunenko, FE Rey, MJ Manary, I Trehan, MG Dominguez-Bello, ... nature 486 (7402), 222-227, 2012 | 4158 | 2012 |
| Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms JG Caporaso, CL Lauber, WA Walters, D Berg-Lyons, J Huntley, N Fierer, ... The ISME journal 6 (8), 1621-1624, 2012 | 4112 | 2012 |
| The human microbiome project PJ Turnbaugh, RE Ley, M Hamady, CM Fraser-Liggett, R Knight, ... Nature 449 (7164), 804-810, 2007 | 3855 | 2007 |
| Linking long-term dietary patterns with gut microbial enterotypes GD Wu, J Chen, C Hoffmann, K Bittinger, YY Chen, SA Keilbaugh, ... Science 334 (6052), 105-108, 2011 | 3758 | 2011 |
| Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample JG Caporaso, CL Lauber, WA Walters, D Berg-Lyons, CA Lozupone, ... Proceedings of the national academy of sciences 108 (Supplement 1), 4516-4522, 2011 | 3649 | 2011 |
| Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences MGI Langille, J Zaneveld, JG Caporaso, D McDonald, D Knights, ... Nature biotechnology 31 (9), 814, 2013 | 3494 | 2013 |
| Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns MG Dominguez-Bello, EK Costello, M Contreras, M Magris, G Hidalgo, ... Proceedings of the National Academy of Sciences 107 (26), 11971-11975, 2010 | 2989 | 2010 |
| An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea D McDonald, MN Price, J Goodrich, EP Nawrocki, TZ DeSantis, A Probst, ... The ISME journal 6 (3), 610, 2012 | 2808 | 2012 |
| PyNAST: a flexible tool for aligning sequences to a template alignment JG Caporaso, K Bittinger, FD Bushman, TZ DeSantis, GL Andersen, ... Bioinformatics 26 (2), 266-267, 2010 | 2732 | 2010 |
| Diversity, stability and resilience of the human gut microbiota CA Lozupone, JI Stombaugh, JI Gordon, JK Jansson, R Knight Nature 489 (7415), 220-230, 2012 | 2600 | 2012 |
| Evolution of mammals and their gut microbes RE Ley, M Hamady, C Lozupone, PJ Turnbaugh, RR Ramey, JS Bircher, ... Science 320 (5883), 1647-1651, 2008 | 2505 | 2008 |
| Bacterial community variation in human body habitats across space and time EK Costello, CL Lauber, M Hamady, N Fierer, JI Gordon, R Knight Science 326 (5960), 1694-1697, 2009 | 2436 | 2009 |
| Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale CL Lauber, M Hamady, R Knight, N Fierer Appl. Environ. Microbiol. 75 (15), 5111-5120, 2009 | 2201 | 2009 |
| The effect of diet on the human gut microbiome: a metagenomic analysis in humanized gnotobiotic mice PJ Turnbaugh, VK Ridaura, JJ Faith, FE Rey, R Knight, JI Gordon Science translational medicine 1 (6), 6ra14-6ra14, 2009 | 2157 | 2009 |
J Gregory CaporasoNorthern Arizona UniversityVerified email at nau.edu
