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Badri N Dubey
Badri N Dubey
Staff Scientist, Centre for Structural Systems Biology (CSSB) Deutsches Elektronen-Synchrotron
Verified email at desy.de - Homepage
Title
Cited by
Cited by
Year
Cyclic di-GMP acts as a cell cycle oscillator to drive chromosome replication
C Lori, S Ozaki, S Steiner, R Böhm, S Abel, BN Dubey, T Schirmer, ...
Nature 523 (7559), 236-239, 2015
2002015
Rho-kinase: regulation,(dys) function, and inhibition
E Amin, BN Dubey, SC Zhang, L Gremer, R Dvorsky, JM Moll, MS Taha, ...
Biological chemistry 394 (11), 1399-1410, 2013
2002013
Cyclic di-GMP mediates a histidine kinase/phosphatase switch by noncovalent domain cross-linking
BN Dubey, C Lori, S Ozaki, G Fucile, I Plaza-Menacho, U Jenal, ...
Science advances 2 (9), e1600823, 2016
852016
Precise timing of transcription by c-di-GMP coordinates cell cycle and morphogenesis in Caulobacter
A Kaczmarczyk, AM Hempel, C von Arx, R Böhm, BN Dubey, J Nesper, ...
Nature communications 11 (1), 816, 2020
442020
An Alternative Active Site Architecture for O2 Activation in the Ergothioneine Biosynthetic EgtB from Chloracidobacterium thermophilum
AR Stampfli, KV Goncharenko, M Meury, BN Dubey, T Schirmer, ...
Journal of the American Chemical Society 141 (13), 5275-5285, 2019
392019
Biochemical assays to characterize Rho GTPases
M Jaiswal, BN Dubey, KT Koessmeier, L Gremer, MR Ahmadian
Rho GTPases: Methods and Protocols, 37-58, 2012
342012
Impact of rRNA methylations on ribosome recycling and fidelity of initiation in Escherichia coli
A Seshadri, B Dubey, MHW Weber, U Varshney
Molecular microbiology 72 (3), 795-808, 2009
342009
Hybrid histidine kinase activation by cyclic di-GMP–mediated domain liberation
BN Dubey, E Agustoni, R Böhm, A Kaczmarczyk, F Mangia, C von Arx, ...
Proceedings of the National Academy of Sciences 117 (2), 1000-1008, 2020
332020
Reciprocal growth control by competitive binding of nucleotide second messengers to a metabolic switch in Caulobacter crescentus
V Shyp, BN Dubey, R Böhm, J Hartl, J Nesper, JA Vorholt, S Hiller, ...
Nature microbiology 6 (1), 59-72, 2021
262021
Precise timing of transcription by c-di-GMP coordinates cell cycle and morphogenesis in Caulobacter. Nat Commun 11: 816
A Kaczmarczyk, AM Hempel, C von Arx, R Bohm, BN Dubey, J Nesper, ...
82020
Structural features discriminating hybrid histidine kinase Rec domains from response regulator homologs
M Brüderlin, R Böhm, F Fadel, S Hiller, T Schirmer, BN Dubey
Nature communications 14 (1), 1002, 2023
52023
Molecular flexibility of Mycobacterium tuberculosis ribosome recycling factor and its functional consequences: An exploration involving mutants
M Selvaraj, A Govindan, A Seshadri, B Dubey, U Varshney, M Vijayan
Journal of biosciences 38, 845-855, 2013
52013
Precise transcription timing by a second-messenger drives a bacterial G1/S cell cycle transition
A Kaczmarczyk, AM Hempel, C von Arx, R Böhm, BN Dubey, J Nesper, ...
bioRxiv, 675330, 2019
42019
Analysis of in-frame dinucleotides, encoded amino acids and synonymous codon choice in bacterial genomes reveals a common pattern
A Ranjan, AY Sinha, B Dubey, A Saikia, AK Buragohain, SK Ray
Current Science, 225-232, 2008
22008
Mutant structure of metabolic switch protein in complex with monomeric c-di-GMP reveals a potential mechanism of protein-mediated ligand dimerization
BN Dubey, V Shyp, G Fucile, H Sondermann, U Jenal, T Schirmer
Scientific reports 13 (1), 2727, 2023
12023
Inhibitory effect of natural flavone luteolin on Streptococcus mutans biofilm formation
L Rudin, N Roth, J Kneubühler, BN Dubey, MM Bornstein, V Shyp
Microbiology spectrum 11 (5), e05223-22, 2023
2023
High-resolution crystal structure of a metabolic switch protein in a complex with monomeric c-di-GMP reveals a potential mechanism for c-di-GMP dimerization
BN Dubey, V Shyp, G Fucile, U Jenal, T Schirmer
bioRxiv, 2022.07. 30.502141, 2022
2022
Intermediaries in phosphotransfer: structural features discriminating hybrid histidine kinase Rec domains from response regulator homologs
M Brüderlin, R Böhm, F Fadel, S Hiller, T Schirmer, BN Dubey
bioRxiv, 2022.06. 03.494635, 2022
2022
Bacterial second messenger switches enzyme into'reverse gear'
BN Dubey, C Lori, S Ozaki, G Fucile, I Plaza-Menacho, U Jenal, ...
Acta Crystallographica Section A: Foundations and Advances 73, C244-C244, 2017
2017
CckA regulation by c-di-GMP: how to steer a bacterial histidine kinase into the phosphate mode
BN Dubey, U Jenal, T Schirmer
Acta Crystallographica Section A: Foundations and Advances 72, s225-s225, 2016
2016
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