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Yana Bromberg
Yana Bromberg
Emory University, Departments of Biology and Computer Science
Verified email at emory.edu - Homepage
Title
Cited by
Cited by
Year
SNAP: predict effect of non-synonymous polymorphisms on function
Y Bromberg, B Rost
Nucleic acids research 35 (11), 3823-3835, 2007
9882007
PredictProtein—an open resource for online prediction of protein structural and functional features
G Yachdav, E Kloppmann, L Kajan, M Hecht, T Goldberg, T Hamp, ...
Nucleic acids research 42 (W1), W337-W343, 2014
6992014
Better prediction of functional effects for sequence variants
M Hecht, Y Bromberg, B Rost
BMC genomics 16, 1-12, 2015
5632015
SNAP predicts effect of mutations on protein function
Y Bromberg, G Yachdav, B Rost
Bioinformatics 24 (20), 2397-2398, 2008
3142008
Collective judgment predicts disease-associated single nucleotide variants
E Capriotti, RB Altman, Y Bromberg
BMC genomics 14, 1-9, 2013
2672013
Comparative genomic and physiological analysis provides insights into the role of Acidobacteria in organic carbon utilization in Arctic tundra soils
SR Rawat, MK Männistö, Y Bromberg, MM Häggblom
FEMS microbiology ecology 82 (2), 341-355, 2012
2002012
PredictProtein-predicting protein structure and function for 29 years
M Bernhofer, C Dallago, T Karl, V Satagopam, M Heinzinger, M Littmann, ...
Nucleic acids research 49 (W1), W535-W540, 2021
1982021
Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies
D Ellinghaus, H Zhang, S Zeissig, S Lipinski, A Till, T Jiang, B Stade, ...
Gastroenterology 145 (2), 339-347, 2013
1842013
De novo coding variants are strongly associated with Tourette disorder
AJ Willsey, TV Fernandez, D Yu, RA King, A Dietrich, J Xing, SJ Sanders, ...
Neuron 94 (3), 486-499. e9, 2017
1772017
Association of functionally significant Melanocortin-4 but not Melanocortin-3 receptor mutations with severe adult obesity in a large North American case–control study
MA Calton, BA Ersoy, S Zhang, JP Kane, MJ Malloy, CR Pullinger, ...
Human molecular genetics 18 (6), 1140-1147, 2009
1562009
Functional analyses of variants reveal a significant role for dominant negative and common alleles in oligogenic Bardet–Biedl syndrome
NA Zaghloul, Y Liu, JM Gerdes, C Gascue, EC Oh, CC Leitch, Y Bromberg, ...
Proceedings of the National Academy of Sciences 107 (23), 10602-10607, 2010
1422010
De novo sequence and copy number variants are strongly associated with Tourette disorder and implicate cell polarity in pathogenesis
S Wang, JD Mandell, Y Kumar, N Sun, MT Morris, J Arbelaez, C Nasello, ...
Cell reports 24 (13), 3441-3454. e12, 2018
1242018
Correlating protein function and stability through the analysis of single amino acid substitutions
Y Bromberg, B Rost
BMC bioinformatics 10, 1-9, 2009
1092009
Predicting functional effects of synonymous variants: a systematic review and perspectives
Z Zeng, Y Bromberg
Frontiers in genetics 10, 914, 2019
1012019
News from the protein mutability landscape
M Hecht, Y Bromberg, B Rost
Journal of molecular biology 425 (21), 3937-3948, 2013
1012013
Chapter 15: disease gene prioritization
Y Bromberg
PLoS computational biology 9 (4), e1002902, 2013
872013
Bioinformatics for personal genome interpretation
E Capriotti, NL Nehrt, MG Kann, Y Bromberg
Briefings in bioinformatics 13 (4), 495-512, 2012
862012
Amino acid encoding for deep learning applications
H ElAbd, Y Bromberg, A Hoarfrost, T Lenz, A Franke, M Wendorff
BMC bioinformatics 21, 1-14, 2020
822020
Evolutionary history of redox metal-binding domains across the tree of life
A Harel, Y Bromberg, PG Falkowski, D Bhattacharya
Proceedings of the National Academy of Sciences 111 (19), 7042-7047, 2014
802014
Comprehensive in silico mutagenesis highlights functionally important residues in proteins
Y Bromberg, B Rost
Bioinformatics 24 (16), i207-i212, 2008
742008
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