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Bojk A. Berghuis
Bojk A. Berghuis
Postdoctoral Scholar, Stanford University
Verified email at stanford.edu
Title
Cited by
Cited by
Year
Hydrogenotrophic methanogenesis in archaeal phylum Verstraetearchaeota reveals the shared ancestry of all methanogens
BA Berghuis, FB Yu, F Schulz, PC Blainey, T Woyke, SR Quake
Proceedings of the National Academy of Sciences 116 (11), 5037-5044, 2019
1782019
A force calibration standard for magnetic tweezers
Z Yu, D Dulin, J Cnossen, M Köber, MM van Oene, O Ordu, BA Berghuis, ...
Review of Scientific Instruments 85 (12), 2014
792014
Elongation-competent pauses govern the fidelity of a viral RNA-dependent RNA polymerase
D Dulin, ID Vilfan, BA Berghuis, S Hage, DH Bamford, MM Poranen, ...
Cell reports 10 (6), 983-992, 2015
742015
Invincible DNA tethers: covalent DNA anchoring for enhanced temporal and force stability in magnetic tweezers experiments
R Janissen, BA Berghuis, D Dulin, M Wink, T van Laar, NH Dekker
Nucleic acids research 42 (18), e137-e137, 2014
612014
Strand separation establishes a sustained lock at the Tus–Ter replication fork barrier
BA Berghuis, D Dulin, ZQ Xu, T Van Laar, B Cross, R Janissen, S Jergic, ...
Nature chemical biology 11 (8), 579-585, 2015
492015
Untangling reaction pathways through modern approaches to high-throughput single-molecule force-spectroscopy experiments
D Dulin, BA Berghuis, M Depken, NH Dekker
Current opinion in structural biology 34, 116-122, 2015
412015
High-throughput, high-force probing of DNA-protein interactions with magnetic tweezers
BA Berghuis, M Köber, T van Laar, NH Dekker
Methods 105, 90-98, 2016
372016
Backtracking behavior in viral RNA-dependent RNA polymerase provides the basis for a second initiation site
D Dulin, ID Vilfan, BA Berghuis, MM Poranen, M Depken, NH Dekker
Nucleic acids research 43 (21), 10421-10429, 2015
352015
What is all this fuss about Tus? Comparison of recent findings from biophysical and biochemical experiments
BA Berghuis, VS Raducanu, MM Elshenawy, S Jergic, M Depken, ...
Critical Reviews in Biochemistry and Molecular Biology 53 (1), 49-63, 2018
182018
Exploring the structure of the N-terminal domain of CP29 with ultrafast fluorescence spectroscopy
BA Berghuis, RB Spruijt, RBM Koehorst, A van Hoek, SP Laptenok, ...
European Biophysics Journal 39, 631-638, 2010
162010
Northstar enables automatic classification of known and novel cell types from tumor samples
F Zanini, BA Berghuis, RC Jones, B Nicolis di Robilant, RY Nong, ...
Scientific reports 10 (1), 15251, 2020
112020
A force calibration standard for magnetic tweezers
Z Yu, D Dulin, JP Cnossen, M Kober, MM van Oene, O Ordu, BA Berghuis, ...
Review of Scientific Instruments 85, 1-10, 2015
22015
Real-time observation of replicative helicase assembly onto single-stranded DNA
D Dulin, Z Yu, TJ Cui, BA Berghuis, M Depken, NH Dekker
BioRxiv, 077800, 2016
12016
Single Molecule Studies of DNA-Binding Proteins: Development of New Covalent DNA Anchoring Techniques for the Study of Rupture Forces of Replication Blocks
R Janissen, BA Berghuis, O Ordu, MM Wink, D Dulin, JP Cnossen, ...
Biophysical Journal 106 (2), 394a, 2014
12014
northstar: leveraging cell atlases to identify healthy and neoplastic cells in transcriptomes from human tumors
F Zanini, BA Berghuis, RC Jones, BN di Robilant, RY Nong, J Norton, ...
bioRxiv, 820928, 2019
2019
Dissection of E. Coli DNA Replication in High Resolution with Temperature-Controlled Magnetic Tweezers
BA Berghuis, JPA Wassenburg, JM Wilschut, T van Laar, NE Dixon, ...
Biophysical Journal 110 (3), 63a, 2016
2016
Enhanced interrogation of DNA roadblocks and RNA polymerases: Pulling information fkom the individual to understand the masses
B Berghuis
2016
SV40 Helicase Unwinds DNA against Force
M Koeber, Z Yu, K Aguan, B Berghuis, D Dulin, NH Dekker
Biophysical Journal 106 (2), 273a, 2014
2014
Roadblocks on the E. Coli genome: the Workings of a molecular mouse trap at the single-molecule level
BA Berghuis, D Dulin, B Cross, NE Dixon, NH Dekker
Biophysical Journal 106 (2), 230a, 2014
2014
SV40 Helicase unwinds DNA against force
M Kober, Z Yu, K Aguan, BA Berghuis, D Dulin, NH Dekker
Biophysical Journal 106 (2), 1-3, 2014
2014
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