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Hao Cheng
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Year
Efficient strategies for leave-one-out cross validation for genomic best linear unbiased prediction
H Cheng, DJ Garrick, RL Fernando
Journal of animal science and biotechnology 8, 1-5, 2017
1242017
Computational strategies for alternative single-step Bayesian regression models with large numbers of genotyped and non-genotyped animals
RL Fernando, H Cheng, BL Golden, DJ Garrick
Genetics Selection Evolution 48, 1-8, 2016
842016
JWAS: Julia implementation of whole-genome analysis software
H Cheng, R Fernando, D Garrick
Proceedings of the world congress on genetics applied to livestock …, 2018
77*2018
Genomic prediction from multiple-trait Bayesian regression methods using mixture priors
H Cheng, K Kizilkaya, J Zeng, D Garrick, R Fernando
Genetics 209 (1), 89-103, 2018
642018
An upper bound for accuracy of prediction using GBLUP
E Karaman, H Cheng, MZ Firat, DJ Garrick, RL Fernando
PloS one 11 (8), e0161054, 2016
592016
Combining phenotype, genotype, and environment to uncover genetic components underlying water use efficiency in Persian walnut
MM Arab, A Marrano, R Abdollahi-Arpanahi, CA Leslie, H Cheng, ...
Journal of experimental botany 71 (3), 1107-1127, 2020
542020
In vitro breeding: application of embryonic stem cells to animal production
DE Goszczynski, H Cheng, S Demyda-Peyrás, JF Medrano, J Wu, ...
Biology of reproduction 100 (4), 885-895, 2019
532019
Pitfalls and remedies for cross validation with multi-trait genomic prediction methods
D Runcie, H Cheng
G3: Genes, Genomes, Genetics 9 (11), 3727-3741, 2019
502019
Genome-wide association analysis and accuracy of genome-enabled breeding value predictions for resistance to infectious hematopoietic necrosis virus in a commercial rainbow …
RL Vallejo, H Cheng, BO Fragomeni, KL Shewbridge, G Gao, ...
Genetics Selection Evolution 51, 1-14, 2019
492019
Pilot study: Application of artificial intelligence for detecting left atrial enlargement on canine thoracic radiographs
S Li, Z Wang, LC Visser, ER Wisner, H Cheng
Veterinary Radiology & Ultrasound, 2020
442020
MegaLMM: mega-scale linear mixed models for genomic predictions with thousands of traits
DE Runcie, J Qu, H Cheng, L Crawford
Genome biology 22, 1-25, 2021
412021
Comparison of alternative approaches to single-trait genomic prediction using genotyped and non-genotyped Hanwoo beef cattle
J Lee, H Cheng, D Garrick, B Golden, J Dekkers, K Park, D Lee, ...
Genetics Selection Evolution 49, 1-9, 2017
412017
A fast and efficient Gibbs sampler for BayesB in whole-genome analyses
H Cheng, L Qu, DJ Garrick, RL Fernando
Genetics Selection Evolution 47, 1-7, 2015
402015
Deciphering of the genetic control of phenology, yield, and pellicle color in Persian walnut (Juglans regia L.)
A Marrano, GM Sideli, CA Leslie, H Cheng, DB Neale
Frontiers in plant science 10, 470068, 2019
392019
Runs of homozygosity in a selected cattle population with extremely inbred bulls: Descriptive and functional analyses revealed highly variable patterns
D Goszczynski, A Molina, E Terán, H Morales-Durand, P Ross, H Cheng, ...
PLoS One 13 (7), e0200069, 2018
372018
An efficient exact method to obtain GBLUP and single-step GBLUP when the genomic relationship matrix is singular
RL Fernando, H Cheng, DJ Garrick
Genetics Selection Evolution 48, 1-12, 2016
342016
A compendium of genetic regulatory effects across pig tissues
J Teng, Y Gao, H Yin, Z Bai, S Liu, H Zeng, PigGTEx Consortium, L Bai, ...
Nature Genetics, 1-12, 2024
262024
XSim: simulation of descendants from ancestors with sequence data
H Cheng, D Garrick, R Fernando
G3: Genes, Genomes, Genetics 5 (7), 1415-1417, 2015
252015
Assessing accuracy of genomic predictions for resistance to infectious hematopoietic necrosis virus with progeny testing of selection candidates in a commercial rainbow trout …
RL Vallejo, BO Fragomeni, H Cheng, G Gao, RL Long, KL Shewbridge, ...
Frontiers in Veterinary Science 7, 590048, 2020
222020
Quantitative phenotyping of shell suture strength in walnut (Juglans regia L.) enhances precision for detection of QTL and genome-wide association mapping
GM Sideli, A Marrano, S Montanari, CA Leslie, BJ Allen, H Cheng, ...
PLoS One 15 (4), e0231144, 2020
212020
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Articles 1–20