Matt E Oates

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Prof. Julian GoughMRC Laboratory of Molecular Biology, CambridgeVerified email at mrc-lmb.cam.ac.uk
Owen RackhamUniversity of SouthamptonVerified email at soton.ac.uk
Ben SmithersPhD Student, University of BristolVerified email at bristol.ac.uk
Christian R VoolstraProfessor (Chair) Adaptation in Aquatic Systems, Head SequAna Core Facility, University of KonstanzVerified email at uni-konstanz.de
Manuel ArandaKing Abdullah University of Science and Technology (KAUST)Verified email at kaust.edu.sa
Adam SardarevotecVerified email at sardar.me.uk
Alistair ForrestSystems Biology and Genomics Lab, Harry Perkins Institute of Medical Research, UWAVerified email at perkins.uwa.edu.au
Vladimir UverskyProfessor, USFVerified email at usf.edu
Zoran ObradovicData Analytics and Biomedical Informatics Center, Temple UniversityVerified email at temple.edu
A. Keith DunkerProfessor of Biochemistry,Indiana University School of MedicineVerified email at iupui.edu
bin xueUniversity of South FloridaVerified email at usf.edu
Pedro RomeroAssociate Scientist, University of Wisconsin MadisonVerified email at wisc.edu
Takashi IshidaDepartment of Computer Science, School of Computing, TokyoVerified email at cs.titech.ac.jp
Mohamed GhalwashResearch Scientist - IBM ResearchVerified email at ibm.com
Dosztanyi ZsuzsannaEötvös Loránd UniversityVerified email at ttk.elte.hu
Yong LiKing Abdullah University of Science and TechnologyVerified email at kaust.edu.sa
Jan ZauchaAstraZeneca, Data Science, Oncology R&DVerified email at astrazeneca.com
M. Madan BabuMember and Endowed Chair, St Jude Children's Research Hospital, USAVerified email at stjude.org
Tilman FlockPalantir Technologies | Former Fellow at University of CambridgeVerified email at palantir.com
Philip C. J. DonoghueProfessor of Palaeobiology, University of Bristol, School of Earth SciencesVerified email at bristol.ac.uk

Matt E Oates

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Verified email at bristol.ac.uk - Homepage

Missense Interpretation Rare Disease Diagnosis Protein Domain Evolution Disordered Protein Function Computational Biology


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The InterPro protein families database: the classification resource after 15 years A Mitchell, HY Chang, L Daugherty, M Fraser, S Hunter, R Lopez, ... Nucleic acids research 43 (D1), D213-D221, 2015	1443	2015
D2P2: Database of Disordered Protein Predictions ME Oates, P Romero, T Ishida, M Ghalwash, MJ Mizianty, B Xue, ... Nucleic Acids Research 41 (D1), D508-D516, 2013	747	2013
The genome of Aiptasia, a sea anemone model for coral symbiosis S Baumgarten, O Simakov, LY Esherick, YJ Liew, EM Lehnert, CT Michell, ... Proceedings of the National Academy of Sciences 112 (38), 11893-11898, 2015	456	2015
An expanded evaluation of protein function prediction methods shows an improvement in accuracy Y Jiang, TR Oron, WT Clark, AR Bankapur, D D’Andrea, R Lepore, ... Genome biology 17 (1), 1-19, 2016	444	2016
A predictive computational framework for direct reprogramming between human cell types JMPJG Owen J L Rackham, Jaber Firas, Hai Fang, Matt E Oates, Melissa L ... Nature Genetics, 2016	318	2016
The SUPERFAMILY 2.0 database: a significant proteome update and a new webserver AP Pandurangan, J Stahlhacke, ME Oates, B Smithers, J Gough Nucleic Acids Research, gky1130, 2018	186	2018
The SUPERFAMILY 1.75 database in 2014: a doubling of data ME Oates, J Stahlhacke, DV Vavoulis, B Smithers, OJL Rackham, ... Nucleic acids research 43 (D1), D227-D233, 2015	90	2015
Structured and disordered facets of the GPCR fold AJ Venkatakrishnan, T Flock, DE Prado, ME Oates, J Gough, ... Current Opinion in Structural Biology 27, 129-137, 2014	90	2014
Hologenome analysis of two marine sponges with different microbiomes T Ryu, L Seridi, L Moitinho-Silva, M Oates, YJ Liew, C Mavromatis, ... BMC genomics 17, 1-11, 2016	84	2016
Molecular Principles of Gene Fusion Mediated Rewiring of Protein Interaction Networks in Cancer NS Latysheva, ME Oates, L Maddox, T Flock, J Gough, M Buljan, ... Molecular Cell 63 (4), 579-592, 2016	65	2016
A subset of ubiquitin-conjugating enzymes is essential for plant immunity B Zhou, RV Mural, X Chen, ME Oates, RA Connor, GB Martin, J Gough, ... Plant physiology 173 (2), 1371-1390, 2017	59	2017
A Subset Of Ubiquitin-Conjugating Enzymes Are Essential For Plant Immunity JGLZ Bangjun Zhou, Ravi V Mural, Xuanyang Chen, Matt E Oates, Richard A ... Plant Physiology, 2016	59*	2016
Evolution of the Calcium-Based Intracellular Signaling System E Marchadier, ME Oates, H Fang, PCJ Donoghue, AM Hetherington, ... Genome Biology and Evolution 8 (7), 2118-2132, 2016	50	2016
Genome3D: exploiting structure to help users understand their sequences TE Lewis, I Sillitoe, A Andreeva, TL Blundell, DWA Buchan, C Chothia, ... Nucleic acids research 43 (D1), D382-D386, 2015	50	2015
A daily-updated tree of (sequenced) life as a reference for genome research H Fang, ME Oates, RB Pethica, JM Greenwood, AJ Sardar, OJL Rackham, ... Scientific Reports 3, 2015, 2013	46	2013
Short-and Long-Term Effects of UVA on Arabidopsis Are Mediated by a Novel cGMP Phosphodiesterase JC Isner, VA Olteanu, AJ Hetherington, A Coupel-Ledru, P Sun, ... Current Biology 29 (15), 2580-2585. e4, 2019	33	2019
‘Why genes in pieces?’—revisited B Smithers, M Oates, J Gough Nucleic acids research 47 (10), 4970-4973, 2019	21	2019
Splice junctions are constrained by protein disorder B Smithers, ME Oates, J Gough Nucleic acids research 43 (10), 4814-4822, 2015	18	2015
The evolution of human cells in terms of protein innovation AJ Sardar, ME Oates, H Fang, ARR Forrest, H Kawaji, ... Molecular biology and evolution 31 (6), 1364-1374, 2014	17	2014
Three reasons protein disorder analysis makes more sense in the light of collagen B Smithers, ME Oates, P Tompa, J Gough Protein Science 25 (5), 1030-1036, 2016	10	2016

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