Alex H Wagner, PhD
Alex H Wagner, PhD
NCI F32 Fellow, MGI, Washington University School of Medicine
Verified email at genome.wustl.edu - Homepage
TitleCited byYear
DGIdb 2.0: mining clinically relevant drug–gene interactions
AH Wagner, AC Coffman, BJ Ainscough, NC Spies, ZL Skidmore, ...
Nucleic acids research 44 (D1), D1036-D1044, 2015
1652015
CIViC is a community knowledgebase for expert crowdsourcing the clinical interpretation of variants in cancer
M Griffith, NC Spies, K Krysiak, JF McMichael, AC Coffman, AM Danos, ...
Nature genetics 49 (2), 170, 2017
1212017
Non-exomic and synonymous variants in ABCA4 are an important cause of Stargardt disease
TA Braun, RF Mullins, AH Wagner, JL Andorf, RM Johnston, BB Bakall, ...
Human molecular genetics 22 (25), 5136-5145, 2013
942013
DGIdb 3.0: a redesign and expansion of the drug–gene interaction database
KC Cotto, AH Wagner, YY Feng, S Kiwala, AC Coffman, G Spies, ...
Nucleic acids research 46 (D1), D1068-D1073, 2017
662017
Exon-level expression profiling of ocular tissues
AH Wagner, VN Anand, WH Wang, JE Chatterton, D Sun, AR Shepard, ...
Experimental eye research 111, 105-111, 2013
562013
GenVisR: genomic visualizations in R
ZL Skidmore, AH Wagner, R Lesurf, KM Campbell, J Kunisaki, OL Griffith, ...
Bioinformatics 32 (19), 3012-3014, 2016
462016
Transcriptomic analysis across nasal, temporal, and macular regions of human neural retina and RPE/choroid by RNA-Seq
SS Whitmore, AH Wagner, AP DeLuca, AV Drack, EM Stone, BA Tucker, ...
Experimental eye research 129, 93-106, 2014
452014
DoCM: a database of curated mutations in cancer
BJ Ainscough, M Griffith, AC Coffman, AH Wagner, J Kunisaki, ...
Nature methods 13 (10), 806, 2016
322016
Optic nerve crush induces spatial and temporal gene expression patterns in retina and optic nerve of BALB/cJ mice
TP Sharma, CM McDowell, Y Liu, AH Wagner, D Thole, BP Faga, ...
Molecular neurodegeneration 9 (1), 14, 2014
162014
Comprehensive genomic analysis reveals FLT3 activation and a therapeutic strategy for a patient with relapsed adult B-lymphoblastic leukemia
M Griffith, OL Griffith, K Krysiak, ZL Skidmore, MJ Christopher, JM Klco, ...
Experimental hematology 44 (7), 603-613, 2016
142016
Recurrent WNT pathway alterations are frequent in relapsed small cell lung cancer
AH Wagner, S Devarakonda, ZL Skidmore, K Krysiak, A Ramu, L Trani, ...
Nature communications 9 (1), 3787, 2018
92018
Prioritization of retinal disease genes: an integrative approach
AH Wagner, KR Taylor, AP DeLuca, TL Casavant, RF Mullins, EM Stone, ...
Human mutation 34 (6), 853-859, 2013
92013
Whole‐gene sequencing investigation of SAT1 in attempted suicide
ET Monson, K de Klerk, SC Gaynor, AH Wagner, ME Breen, M Parsons, ...
American Journal of Medical Genetics Part B: Neuropsychiatric Genetics 171 …, 2016
42016
CIViC: A knowledgebase for expert-crowdsourcing the clinical interpretation of variants in cancer.
M Griffith, NC Spies, K Krysiak, AC Coffman, JF McMichael, BJ Ainscough, ...
BioRxiv, 072892, 2016
42016
Standard operating procedure for somatic variant refinement of sequencing data with paired tumor and normal samples
EK Barnell, P Ronning, KM Campbell, K Krysiak, BJ Ainscough, LM Sheta, ...
Genetics in Medicine 21 (4), 972, 2019
32019
Standard operating procedure for somatic variant refinement of tumor sequencing data
EK Barnell, P Ronning, KM Campbell, K Krysiak, BJ Ainscough, ...
BioRxiv, 266262, 2018
32018
The Ocular Tissue Database
T Braun, A Wagner, A DeLuca, T Casavant, T Scheetz, A Clark, R Mullins, ...
Investigative Ophthalmology & Visual Science 54 (15), 3383-3383, 2013
32013
A deep learning approach to automate refinement of somatic variant calling from cancer sequencing data
BJ Ainscough, EK Barnell, P Ronning, KM Campbell, AH Wagner, ...
Nature genetics 50 (12), 1735, 2018
22018
Adapting crowdsourced clinical cancer curation in CIViC to the ClinGen minimum variant level data community‐driven standards
AM Danos, DI Ritter, AH Wagner, K Krysiak, D Sonkin, C Micheel, ...
Human mutation 39 (11), 1721-1732, 2018
22018
Sequencing and disease variation detection tools and techniques
AP DeLuca, AH Wagner, KR Taylor, B Faga, D Thole, VC Sheffield, ...
2011 9th IEEE/ACS International Conference on Computer Systems and …, 2011
22011
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Articles 1–20