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Tim Kahlke
Tim Kahlke
Head of Bioinformatics, Blue Mountains Analytics
Verified email at bluemountainsanalytics.com.au
Title
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Cited by
Year
Emerging technologies in algal biotechnology: toward the establishment of a sustainable, algae-based bioeconomy
M Fabris, RM Abbriano, M Pernice, DL Sutherland, AS Commault, ...
Frontiers in plant science 11, 279, 2020
2602020
Genetic correlation between amyotrophic lateral sclerosis and schizophrenia
RL McLaughlin, D Schijven, W Van Rheenen, KR Van Eijk, M O’brien, ...
Nature communications 8 (1), 14774, 2017
1342017
Defining the core microbiome of the symbiotic dinoflagellate, Symbiodinium
CA Lawson, JB Raina, T Kahlke, JR Seymour, DJ Suggett
Environmental microbiology reports 10 (1), 7-11, 2018
1122018
DNA sequencing as a tool to monitor marine ecological status
KD Goodwin, LR Thompson, B Duarte, T Kahlke, AR Thompson, ...
Frontiers in Marine Science 4, 107, 2017
1122017
Symbiodiniaceae‐bacteria interactions: rethinking metabolite exchange in reef‐building corals as multi‐partner metabolic networks
JL Matthews, JB Raina, T Kahlke, JR Seymour, MJH van Oppen, ...
Environmental Microbiology 22 (5), 1675-1687, 2020
1102020
Coral microbiome diversity reflects mass coral bleaching susceptibility during the 2016 El Niño heat wave
SG Gardner, EF Camp, DJ Smith, T Kahlke, EO Osman, G Gendron, ...
Ecology and evolution 9 (3), 938-956, 2019
802019
EMMA 2–a MAGE-compliant system for the collaborative analysis and integration of microarray data
M Dondrup, SP Albaum, T Griebel, K Henckel, S Jünemann, T Kahlke, ...
BMC bioinformatics 10, 1-14, 2009
792009
BASTA–Taxonomic classification of sequences and sequence bins using Last Common Ancestor estimations
T Kahlke, PJ Ralph
Methods in Ecology and Evolution, 2018
742018
Whole-genome sequencing reveals clonal expansion of multiresistant Staphylococcus haemolyticus in European hospitals
JP Cavanagh, E Hjerde, MTG Holden, T Kahlke, C Klingenberg, ...
Journal of Antimicrobial Chemotherapy 69 (11), 2920-2927, 2014
742014
Regional and microenvironmental scale characterization of the Zostera muelleri seagrass microbiome
V Hurtado-McCormick, T Kahlke, K Petrou, T Jeffries, PJ Ralph, ...
Frontiers in microbiology 10, 444656, 2019
652019
Variability in the composition of Pacific oyster microbiomes across oyster families exhibiting different levels of susceptibility to OsHV-1 μvar disease
WL King, N Siboni, NLR Williams, T Kahlke, KV Nguyen, C Jenkins, ...
Frontiers in microbiology 10, 432402, 2019
652019
Revealing changes in the microbiome of Symbiodiniaceae under thermal stress
EF Camp, T Kahlke, MR Nitschke, D Varkey, NL Fisher, L Fujise, S Goyen, ...
Environmental Microbiology 22 (4), 1294-1309, 2020
592020
Systematic, continental scale temporal monitoring of marine pelagic microbiota by the Australian Marine Microbial Biodiversity Initiative
MV Brown, J Van De Kamp, M Ostrowski, JR Seymour, T Ingleton, ...
Scientific data 5 (1), 1-10, 2018
552018
Perspectives for glyco-engineering of recombinant biopharmaceuticals from microalgae
L Barolo, RM Abbriano, AS Commault, J George, T Kahlke, M Fabris, ...
Cells 9 (3), 633, 2020
512020
The microbiome of the cosmopolitan diatom Leptocylindrus reveals significant spatial and temporal variability
PA Ajani, T Kahlke, N Siboni, R Carney, SA Murray, JR Seymour
Frontiers in microbiology 9, 421365, 2018
452018
Unlocking the phylogenetic diversity, primary habitats, and abundances of free‐living Symbiodiniaceae on a coral reef
L Fujise, DJ Suggett, M Stat, T Kahlke, M Bunce, SG Gardner, S Goyen, ...
Molecular Ecology 30 (1), 343-360, 2021
442021
Metabolic engineering strategies in diatoms reveal unique phenotypes and genetic configurations with implications for algal genetics and synthetic biology
J George, T Kahlke, RM Abbriano, U Kuzhiumparambil, PJ Ralph, ...
Frontiers in Bioengineering and Biotechnology 8, 513, 2020
442020
Genome sequencing as a new window into the microbial community of membrane bioreactors–A critical review
LN Nguyen, AS Commault, T Kahlke, PJ Ralph, GU Semblante, ...
Science of the total environment 704, 135279, 2020
372020
A new high throughput sequencing assay for characterizing the diversity of natural Vibrio communities and its application to a Pacific oyster mortality event
WL King, N Siboni, T Kahlke, TJ Green, M Labbate, JR Seymour
Frontiers in microbiology 10, 498862, 2019
352019
Bioluminescence
T Kahlke, KDL Umbers
Current Biology 26 (8), R313-R314, 2016
342016
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