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Alessandro Vullo
Alessandro Vullo
Machine Learning Engineer
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Cited by
Cited by
Year
Ensembl 2018
DR Zerbino, P Achuthan, W Akanni, MR Amode, D Barrell, J Bhai, K Billis, ...
Nucleic acids research 46 (D1), D754-D761, 2018
30292018
Ensembl 2020
AD Yates, P Achuthan, W Akanni, J Allen, J Allen, J Alvarez-Jarreta, ...
Nucleic acids research 48 (D1), D682-D688, 2020
17302020
Ensembl 2015
F Cunningham, MR Amode, D Barrell, K Beal, K Billis, S Brent, ...
Nucleic acids research 43 (D1), D662-D669, 2015
16712015
Ensembl 2016
A Yates, W Akanni, MR Amode, D Barrell, K Billis, D Carvalho-Silva, ...
Nucleic acids research 44 (D1), D710-D716, 2016
16332016
Ensembl 2014
P Flicek, MR Amode, D Barrell, K Beal, K Billis, S Brent, D Carvalho-Silva, ...
Nucleic acids research 42 (D1), D749-D755, 2014
15842014
Ensembl 2019
F Cunningham, P Achuthan, W Akanni, J Allen, MR Amode, IM Armean, ...
Nucleic acids research 47 (D1), D745-D751, 2019
9762019
Ensembl 2017
BL Aken, P Achuthan, W Akanni, MR Amode, F Bernsdorff, J Bhai, K Billis, ...
Nucleic acids research 45 (D1), D635-D642, 2017
6162017
Ensembl Genomes 2018: an integrated omics infrastructure for non-vertebrate species
PJ Kersey, JE Allen, A Allot, M Barba, S Boddu, BJ Bolt, D Carvalho-Silva, ...
Nucleic acids research 46 (D1), D802-D808, 2018
4852018
DISULFIND: a disulfide bonding state and cysteine connectivity prediction server
A Ceroni, A Passerini, A Vullo, P Frasconi
Nucleic acids research 34 (suppl_2), W177-W181, 2006
4202006
The Ensembl REST API: Ensembl data for any language
A Yates, K Beal, S Keenan, W McLaren, M Pignatelli, GRS Ritchie, ...
Bioinformatics 31 (1), 143-145, 2015
2012015
Disulfide connectivity prediction using recursive neural networks and evolutionary information
A Vullo, P Frasconi
Bioinformatics 20 (5), 653-659, 2004
1972004
Spritz: a server for the prediction of intrinsically disordered regions in protein sequences using kernel machines
A Vullo, O Bortolami, G Pollastri, SCE Tosatto
Nucleic acids research 34 (suppl_2), W164-W168, 2006
1602006
Accurate prediction of protein secondary structure and solvent accessibility by consensus combiners of sequence and structure information
G Pollastri, AJM Martin, C Mooney, A Vullo
BMC bioinformatics 8 (1), 1-12, 2007
1582007
A two-stage approach for improved prediction of residue contact maps
A Vullo, I Walsh, G Pollastri
BMC bioinformatics 7 (1), 1-12, 2006
1162006
Distill: a suite of web servers for the prediction of one-, two-and three-dimensional structural features of proteins
D Baú, AJM Martin, C Mooney, A Vullo, I Walsh, G Pollastri
BMC bioinformatics 7 (1), 1-8, 2006
1112006
CSpritz: accurate prediction of protein disorder segments with annotation for homology, secondary structure and linear motifs
I Walsh, AJM Martin, T Di Domenico, A Vullo, G Pollastri, SCE Tosatto
Nucleic acids research 39 (suppl_2), W190-W196, 2011
1102011
Ensembl core software resources: storage and programmatic access for DNA sequence and genome annotation
M Ruffier, A Kähäri, M Komorowska, S Keenan, M Laird, I Longden, ...
Database 2017, 2017
772017
Hidden Markov models for text categorization in multi-page documents
P Frasconi, G Soda, A Vullo
Journal of Intelligent Information Systems 18 (2), 195-217, 2002
732002
Large-scale prediction of disulphide bond connectivity
PBJ Cheng, A Vullo
Advances in Neural Information Processing Systems 17: Proceedings of the …, 2005
672005
Ab initio and template-based prediction of multi-class distance maps by two-dimensional recursive neural networks
I Walsh, D Baù, AJM Martin, C Mooney, A Vullo, G Pollastri
BMC structural biology 9 (1), 1-20, 2009
652009
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Articles 1–20