Aleksandr B. Sahakyan
Aleksandr B. Sahakyan
Group Leader, Integrative Computational Biology and Machine Learning, WIMM, University of Oxford
Verified email at imm.ox.ac.uk - Homepage
Title
Cited by
Cited by
Year
rG4-seq reveals widespread formation of G-quadruplex structures in the human transcriptome
CK Kwok, G Marsico, AB Sahakyan, VS Chambers, S Balasubramanian
Nature methods 13 (10), 841-844, 2016
1582016
Whole genome experimental maps of DNA G-quadruplexes in multiple species
G Marsico, VS Chambers, AB Sahakyan, P McCauley, JM Boutell, ...
Nucleic acids research 47 (8), 3862-3874, 2019
722019
Cyclophilin A catalyzes proline isomerization by an electrostatic handle mechanism
C Camilloni, AB Sahakyan, MJ Holliday, NG Isern, F Zhang, ...
Proceedings of the National Academy of Sciences 111 (28), 10203-10208, 2014
562014
Structure-based prediction of methyl chemical shifts in proteins
AB Sahakyan, WF Vranken, A Cavalli, M Vendruscolo
Journal of biomolecular NMR 50 (4), 331, 2011
562011
Structural analysis using SHALiPE to reveal RNA G‐quadruplex formation in human precursor microRNA
CK Kwok, AB Sahakyan, S Balasubramanian
Angewandte Chemie 128 (31), 9104-9107, 2016
492016
Selective chemical labeling of natural T modifications in DNA
RE Hardisty, F Kawasaki, AB Sahakyan, S Balasubramanian
Journal of the American Chemical Society 137 (29), 9270-9272, 2015
422015
Machine learning model for sequence-driven DNA G-quadruplex formation
AB Sahakyan, VS Chambers, G Marsico, T Santner, M Di Antonio, ...
Scientific reports 7 (1), 1-11, 2017
392017
G-quadruplex structures within the 3′ UTR of LINE-1 elements stimulate retrotransposition
AB Sahakyan, P Murat, C Mayer, S Balasubramanian
Nature Structural and Molecular Biology 24, 2017
332017
ALMOST: an all atom molecular simulation toolkit for protein structure determination
B Fu, AB Sahakyan, C Camilloni, GG Tartaglia, E Paci, A Caflisch, ...
Journal of Computational Chemistry 35 (14), 1101-1105, 2014
262014
Analysis of the contributions of ring current and electric field effects to the chemical shifts of RNA bases
AB Sahakyan, M Vendruscolo
The Journal of Physical Chemistry B 117 (7), 1989-1998, 2013
252013
Using Side‐Chain Aromatic Proton Chemical Shifts for a Quantitative Analysis of Protein Structures
AB Sahakyan, WF Vranken, A Cavalli, M Vendruscolo
Angewandte Chemie International Edition 50 (41), 9620-9623, 2011
222011
A conformational ensemble derived using NMR methyl chemical shifts reveals a mechanical clamping transition that gates the binding of the HU protein to DNA
A Kannan, C Camilloni, AB Sahakyan, A Cavalli, M Vendruscolo
Journal of the American Chemical Society 136 (6), 2204-2207, 2014
192014
Structural analysis reveals the formation and role of RNA G-quadruplex structures in human mature microRNAs
KL Chan, B Peng, MI Umar, CY Chan, AB Sahakyan, MTN Le, CK Kwok
Chemical communications 54 (77), 10878-10881, 2018
172018
Dielectric permittivity and temperature effects on spin–spin couplings studied on acetonitrile
AB Sahakyan, AA Shahkhatuni, AG Shahkhatuni, HA Panosyan
Magnetic Resonance in Chemistry 46 (1), 63-68, 2008
162008
Electric Field Effects on One-Bond Indirect Spin− Spin Coupling Constants and Possible Biomolecular Perspectives
AB Sahakyan, AG Shahkhatuni, AA Shahkhatuni, HA Panosyan
The Journal of Physical Chemistry A 112 (16), 3576-3586, 2008
152008
A geometrical parametrization of C1′-C5′ RNA ribose chemical shifts calculated by density functional theory
R Suardíaz, AB Sahakyan, M Vendruscolo
The Journal of Chemical Physics 139 (3), 034101, 2013
112013
Long genes and genes with multiple splice variants are enriched in pathways linked to cancer and other multigenic diseases
AB Sahakyan, S Balasubramanian
BMC Genomics 17 (1), 225, 2016
82016
Assessment of solvent effects: do weak alignment media affect the structure of the solute?
AA Shahkhatuni, AG Shahkhatuni, HA Panosyan, AB Sahakyan, ...
Magnetic Resonance in Chemistry 45 (7), 557-563, 2007
82007
Protein structure validation using side-chain chemical shifts
AB Sahakyan, A Cavalli, WF Vranken, M Vendruscolo
The Journal of Physical Chemistry B 116 (16), 4754-4759, 2012
52012
Torsion sensitivity in NMR of aligned molecules: study on various substituted biphenyls
AB Sahakyan, AG Shahkhatuni, AA Shahkhatuni, HA Panosyan
Magnetic Resonance in Chemistry 46 (2), 144-149, 2008
52008
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Articles 1–20