| ggseqlogo: a versatile R package for drawing sequence logos O Wagih Bioinformatics 33 (22), 3645-3647, 2017 | 194 | 2017 |
| The mutational landscape of phosphorylation signaling in cancer J Reimand, O Wagih, GD Bader Scientific reports 3 (1), 1-9, 2013 | 161 | 2013 |
| Quantitative CRISPR interference screens in yeast identify chemical-genetic interactions and new rules for guide RNA design JD Smith, S Suresh, U Schlecht, M Wu, O Wagih, G Peltz, RW Davis, ... Genome biology 17 (1), 1-16, 2016 | 123 | 2016 |
| SGAtools: one-stop analysis and visualization of array-based genetic interaction screens O Wagih, M Usaj, A Baryshnikova, B VanderSluis, E Kuzmin, M Costanzo, ... Nucleic acids research 41 (W1), W591-W596, 2013 | 101 | 2013 |
| Quantitative genome-wide genetic interaction screens reveal global epistatic relationships of protein complexes in Escherichia coli M Babu, R Arnold, C Bundalovic-Torma, A Gagarinova, KS Wong, ... PLoS Genet 10 (2), e1004120, 2014 | 96 | 2014 |
| Gitter: a robust and accurate method for quantification of colony sizes from plate images O Wagih, L Parts G3: Genes, Genomes, Genetics 4 (3), 547-552, 2014 | 56 | 2014 |
| MIMP: predicting the impact of mutations on kinase-substrate phosphorylation O Wagih, J Reimand, GD Bader Nature methods 12 (6), 531-533, 2015 | 54 | 2015 |
| Evolutionary constraint and disease associations of post-translational modification sites in human genomes J Reimand, O Wagih, GD Bader PLoS Genet 11 (1), e1004919, 2015 | 53 | 2015 |
| Microevolution of serial clinical isolates of Cryptococcus neoformans var. grubii and C. gattii Y Chen, RA Farrer, C Giamberardino, S Sakthikumar, A Jones, T Yang, ... MBio 8 (2), 2017 | 42 | 2017 |
| A resource of variant effect predictions of single nucleotide variants in model organisms O Wagih, M Galardini, BP Busby, D Memon, A Typas, P Beltrao Molecular systems biology 14 (12), e8430, 2018 | 40 | 2018 |
| Conditional epistatic interaction maps reveal global functional rewiring of genome integrity pathways in Escherichia coli A Kumar, N Beloglazova, C Bundalovic-Torma, S Phanse, V Deineko, ... Cell reports 14 (3), 648-661, 2016 | 32 | 2016 |
| Phenotype inference in an Escherichia coli strain panel M Galardini, A Koumoutsi, L Herrera-Dominguez, JAC Varela, A Telzerow, ... Elife 6, e31035, 2017 | 30 | 2017 |
| Uncovering phosphorylation-based specificities through functional interaction networks O Wagih, N Sugiyama, Y Ishihama, P Beltrao Molecular & Cellular Proteomics 15 (1), 236-245, 2016 | 30 | 2016 |
| Systematic analysis of transcriptional and post-transcriptional regulation of metabolism in yeast E Gonçalves, Z Raguz Nakic, M Zampieri, O Wagih, D Ochoa, U Sauer, ... PLoS computational biology 13 (1), e1005297, 2017 | 28 | 2017 |
| Capturing variation impact on molecular interactions in the IMEx Consortium mutations data set N Del-Toro, M Duesbury, M Koch, L Perfetto, A Shrivastava, D Ochoa, ... Nature communications 10 (1), 1-14, 2019 | 20 | 2019 |
| Prediction of functionally important phospho-regulatory events in Xenopus laevis oocytes JR Johnson, SD Santos, T Johnson, U Pieper, M Strumillo, O Wagih, ... PLoS Comput Biol 11 (8), e1004362, 2015 | 14 | 2015 |
| Identifications of putative PKA substrates with quantitative phosphoproteomics and primary-sequence-based scoring H Imamura, O Wagih, T Niinae, N Sugiyama, P Beltrao, Y Ishihama Journal of proteome research 16 (4), 1825-1830, 2017 | 11 | 2017 |
| Allele-specific transcription factor binding as a benchmark for assessing variant impact predictors O Wagih, D Merico, A Delong, BJ Frey BioRxiv, 253427, 2018 | 8 | 2018 |
| Comprehensive variant effect predictions of single nucleotide variants in model organisms O Wagih, B Busby, M Galardini, D Memon, A Typas, P Beltrao BioRxiv, 313031, 2018 | 7 | 2018 |
| RWebLogo: plotting custom sequence logos O Wagih The Comprehensive R Archive Network, 2014 | 6 | 2014 |
Pedro BeltraoGroup Leader, EMBL-EBIVerified email at ebi.ac.uk
