Sebastian Schmeier
Sebastian Schmeier
School of Natural and Computational Sciences, Massey University, Auckland, New Zealand
Verified email at massey.ac.nz - Homepage
TitleCited byYear
A promoter-level mammalian expression atlas
ARR Forrest, H Kawaji, M Rehli, JK Baillie, MJL de Hoon, V Haberle, ...
Nature 507, 462–470, 2014
6762014
An atlas of combinatorial transcriptional regulation in mouse and man
T Ravasi, H Suzuki, CV Cannistraci, S Katayama, VB Bajic, K Tan, ...
Cell 140 (5), 744-752, 2010
5952010
The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line
H Suzuki, ARR Forrest, E Van Nimwegen, CO Daub, PJ Balwierz, ...
Nature genetics 41 (5), 553, 2009
3862009
An atlas of human long non-coding RNAs with accurate 5′ ends
CC Hon, JA Ramilowski, J Harshbarger, N Bertin, OJL Rackham, J Gough, ...
Nature 543 (7644), 199-204, 2017
3172017
Bioconda: sustainable and comprehensive software distribution for the life sciences.
B Grüning, R Dale, A Sjödin, BA Chapman, J Rowe, CH Tomkins-Tinch, ...
Nature methods 15 (7), 475, 2018
1242018
Deciphering the transcriptional circuitry of microRNA genes expressed during human monocytic differentiation
S Schmeier, C MacPherson, M Essack, M Kaur, U Schaefer, H Suzuki, ...
BMC genomics 10 (1), 595, 2009
732009
TcoF-DB: dragon database for human transcription co-factors and transcription factor interacting proteins
U Schaefer, S Schmeier, VB Bajic
Nucleic acids research 39 (suppl_1), D106-D110, 2010
592010
Finding kinetic parameters using text mining
J Hakenberg, S Schmeier, A Kowald, E Klipp, U Leser
OMICS: A Journal of Integrative Biology 8 (2), 131-152, 2004
462004
DDPC: dragon database of genes associated with prostate cancer
M Maqungo, M Kaur, SK Kwofie, A Radovanovic, U Schaefer, S Schmeier, ...
Nucleic acids research 39 (suppl_1), D980-D985, 2011
422011
dPORE-miRNA: Polymorphic Regulation of MicroRNA Genes
S Schmeier, U Schaefer, CR MacPherson, VB Bajic
PloS one 6 (2), e16657, 2011
402011
Database for exploration of functional context of genes implicated in ovarian cancer
M Kaur, A Radovanovic, M Essack, U Schaefer, M Maqungo, T Kibler, ...
Nucleic acids research 37 (suppl_1), D820-D823, 2008
402008
Batf2/Irf1 induces inflammatory responses in classically activated macrophages, lipopolysaccharides, and mycobacterial infection
S Roy, R Guler, SP Parihar, S Schmeier, B Kaczkowski, H Nishimura, ...
The Journal of Immunology 194 (12), 6035-6044, 2015
392015
Redefining the transcriptional regulatory dynamics of classically and alternatively activated macrophages by deepCAGE transcriptomics
S Roy, S Schmeier, E Arner, T Alam, SP Parihar, M Ozturk, O Tamgue, ...
Nucleic acids research 43 (14), 6969-6982, 2015
372015
Distinct gut microbiome patterns associate with consensus molecular subtypes of colorectal cancer
RV Purcell, M Visnovska, PJ Biggs, S Schmeier, FA Frizelle
Scientific Reports 7 (1), 11590, 2017
322017
MACAT—microarray chromosome analysis tool
J Toedling, S Schmeier, M Heinig, B Georgi, S Roepcke
Bioinformatics 21 (9), 2112-2113, 2004
322004
Network analysis of microRNAs and their regulation in human ovarian cancer
S Schmeier, U Schaefer, M Essack, V Bajic
BMC Systems Biology 5 (1), 183, 2011
292011
DDEC: Dragon database of genes implicated in esophageal cancer
M Essack, A Radovanovic, U Schaefer, S Schmeier, S Seshadri, ...
BMC cancer 9 (1), 219, 2009
292009
TcoF-DB v2: update of the database of human and mouse transcription co-factors and transcription factor interactions
S Schmeier, T Alam, M Essack, VB Bajic
Nucleic acids research, gkw1007, 2016
202016
IL-4Rα-Dependent Alternative Activation of Macrophages Is Not Decisive for Mycobacterium tuberculosis Pathology and Bacterial Burden in Mice.
R Guler, SP Parihar, S Savvi, E Logan, A Schwegmann, S Roy, ...
PloS one 10 (3), e0121070, 2015
132015
In Silico discovery of transcription factors as potential diagnostic biomarkers of ovarian cancer
M Kaur, C MacPherson, S Schmeier, K Narasimhan, M Choolani, V Bajic
BMC Systems Biology 5 (1), 144, 2011
112011
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