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Mitchel Cole
Mitchel Cole
MD/PhD Student, UCSF
Verified email at ucsf.edu
Title
Cited by
Cited by
Year
CRISPResso2 provides accurate and rapid genome editing sequence analysis
K Clement, H Rees, MC Canver, JM Gehrke, R Farouni, JY Hsu, MA Cole, ...
Nature biotechnology 37 (3), 224-226, 2019
9302019
Highly efficient therapeutic gene editing of human hematopoietic stem cells
Y Wu, J Zeng, BP Roscoe, P Liu, Q Yao, CR Lazzarotto, K Clement, ...
Nature medicine 25 (5), 776-783, 2019
4262019
Genome-wide CRISPR-Cas9 screen identifies leukemia-specific dependence on a pre-mRNA metabolic pathway regulated by DCPS
T Yamauchi, T Masuda, MC Canver, M Seiler, Y Semba, M Shboul, ...
Cancer cell 33 (3), 386-400. e5, 2018
1232018
Variant-aware saturating mutagenesis using multiple Cas9 nucleases identifies regulatory elements at trait-associated loci
MC Canver, S Lessard, L Pinello, Y Wu, Y Ilboudo, EN Stern, ...
Nature genetics 49 (4), 625-634, 2017
1112017
Rational targeting of a NuRD subcomplex guided by comprehensive in situ mutagenesis
F Sher, M Hossain, D Seruggia, VAC Schoonenberg, Q Yao, P Cifani, ...
Nature genetics 51 (7), 1149-1159, 2019
922019
ZNF410 represses fetal globin by singular control of CHD4
DS Vinjamur, Q Yao, MA Cole, C McGuckin, C Ren, J Zeng, M Hossain, ...
Nature genetics 53 (5), 719-728, 2021
462021
Distinct nuclear compartment-associated genome architecture in the developing mammalian brain
SH Ahanger, RN Delgado, E Gil, MA Cole, J Zhao, SJ Hong, ...
Nature neuroscience 24 (9), 1235-1242, 2021
322021
CRISPR-SURF: discovering regulatory elements by deconvolution of CRISPR tiling screen data
JY Hsu, CP Fulco, MA Cole, MC Canver, D Pellin, F Sher, R Farouni, ...
Nature methods 15 (12), 992-993, 2018
322018
CRISPRO: identification of functional protein coding sequences based on genome editing dense mutagenesis
VAC Schoonenberg, MA Cole, Q Yao, C Macias-Treviņo, F Sher, ...
Genome biology 19, 1-19, 2018
312018
Rapid deployment of SARS-CoV-2 testing: The CLIAHUB
ED Crawford, I Acosta, V Ahyong, EC Anderson, S Arevalo, D Asarnow, ...
PLoS pathogens 16 (10), e1008966, 2020
222020
Dual genome-wide coding and lncRNA screens in neural induction of induced pluripotent stem cells
D Wu, A Poddar, E Ninou, E Hwang, MA Cole, SJ Liu, MA Horlbeck, ...
Cell genomics 2 (11), 2022
122022
Accurate and rapid analysis of genome editing data from nucleases and base editors with CRISPResso2
K Clement, H Rees, MC Canver, JM Gehrke, R Farouni, JY Hsu, MA Cole, ...
Nature biotechnology 37 (3), 224, 2019
102019
Analysis and comparison of genome editing using CRISPResso2
K Clement, H Rees, MC Canver, JM Gehrke, R Farouni, JY Hsu, M Cole, ...
bioRxiv, 392217, 2018
72018
Genome-wide CRISPR screen identifies PAICS, an enzyme involved in de novo purine synthesis, as a potential target for AML therapy
T Yamauchi, K Miyawaki, Y Semba, F Nakao, T Sugio, K Sasaki, ...
Clinical Lymphoma, Myeloma and Leukemia 19, S216-S217, 2019
22019
Highly Efficient Therapeutic Gene Editing of BCL11A enhancer in Human Hematopoietic Stem Cells from ss-Hemoglobinopathy Patients for Fetal Hemoglobin Induction
J Zeng, DE Bauer, Y Wu, BP Roscoe, P Liu, Q Yao, C Lazzarrotto, ...
Blood 132, 3482, 2018
22018
Rational Targeting of a NuRD Sub-Complex for Fetal Hemoglobin Induction Following Comprehensive in Situ Mutagenesis
M Hossain, F Sher, D Seruggia, V Schoonenberg, MA Cole, P Cifani, ...
Blood 132, 2342, 2018
12018
CRISPRO Identifies Functional Protein Coding Sequences Based on Genome Editing Dense Mutagenesis
VAC Schoonenberg, MA Cole, Q Yao, C Macias-Treviņo, F Sher, ...
bioRxiv, 326504, 2018
12018
Genome-Wide CRISPR/Cas9 Screen Reveals That the Dcps Scavenger Decapping Enzyme Is Essential for AML Cell Survival
T Yamauchi, T Masuda, MC Canver, M Seiler, M Shboul, M Maeda, ...
Blood 130, 782, 2017
12017
High-resolution CRISPR functional genomics reveals critical vulnerabilities of the NuRD complex for fetal hemoglobin control
F Sher, V Schoonenberg, MA Cole, C Macias-Trevino, P Cifani, ...
Blood 130, 286, 2017
12017
ZNF410 represses fetal globin by devoted control of CHD4/NuRD [preprint]
DS Vinjamur, Q Yao, MA Cole, C McGuckin, C Ren, J Zeng, M Hossain, ...
2020
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