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Thomas Connor
Thomas Connor
Verified email at cardiff.ac.uk
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Cited by
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Year
A tale of three next generation sequencing platforms: comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers
MA Quail, M Smith, P Coupland, TD Otto, SR Harris, TR Connor, A Bertoni, ...
BMC genomics 13 (1), 1-13, 2012
26292012
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
NJ Croucher, AJ Page, TR Connor, AJ Delaney, JA Keane, SD Bentley, ...
Nucleic acids research 43 (3), e15-e15, 2015
18082015
Genomic analysis of diversity, population structure, virulence, and antimicrobial resistance in Klebsiella pneumoniae, an urgent threat to public health
KE Holt, H Wertheim, RN Zadoks, S Baker, CA Whitehouse, D Dance, ...
Proceedings of the National Academy of Sciences 112 (27), E3574-E3581, 2015
10702015
Evaluating the effects of SARS-CoV-2 spike mutation D614G on transmissibility and pathogenicity
E Volz, V Hill, JT McCrone, A Price, D Jorgensen, Á O’Toole, J Southgate, ...
Cell 184 (1), 64-75. e11, 2021
10312021
Emergence and global spread of epidemic healthcare-associated Clostridium difficile
M He, F Miyajima, P Roberts, L Ellison, DJ Pickard, MJ Martin, TR Connor, ...
Nature genetics 45 (1), 109-113, 2013
7912013
Preliminary genomic characterisation of an emergent SARS-CoV-2 lineage in the UK defined by a novel set of spike mutations
R Andrew
Virological, 2020
7722020
Evidence for several waves of global transmission in the seventh cholera pandemic
A Mutreja, DW Kim, NR Thomson, TR Connor, JH Lee, S Kariuki, ...
Nature 477 (7365), 462-465, 2011
7702011
Hospital admission and emergency care attendance risk for SARS-CoV-2 delta (B. 1.617. 2) compared with alpha (B. 1.1. 7) variants of concern: a cohort study
KA Twohig, T Nyberg, A Zaidi, S Thelwall, MA Sinnathamby, S Aliabadi, ...
The Lancet Infectious Diseases 22 (1), 35-42, 2022
7472022
Targeted Restoration of the Intestinal Microbiota with a Simple, Defined Bacteriotherapy Resolves Relapsing Clostridium difficile Disease in Mice
TD Lawley, S Clare, AW Walker, MD Stares, TR Connor, C Raisen, ...
PLoS pathogens 8 (10), e1002995, 2012
6352012
Hierarchical and spatially explicit clustering of DNA sequences with BAPS software
L Cheng, TR Connor, J Sirén, DM Aanensen, J Corander
Molecular biology and evolution 30 (5), 1224-1228, 2013
5832013
Intracontinental spread of human invasive Salmonella Typhimurium pathovariants in sub-Saharan Africa
CK Okoro, RA Kingsley, TR Connor, SR Harris, CM Parry, ...
Nature genetics 44 (11), 1215-1221, 2012
4382012
Recurrent emergence of SARS-CoV-2 spike deletion H69/V70 and its role in the Alpha variant B. 1.1. 7
B Meng, SA Kemp, G Papa, R Datir, IATM Ferreira, S Marelli, WT Harvey, ...
Cell reports 35 (13), 2021
3982021
Distinguishable epidemics of multidrug-resistant Salmonella Typhimurium DT104 in different hosts
AE Mather, SWJ Reid, DJ Maskell, J Parkhill, MC Fookes, SR Harris, ...
Science 341 (6153), 1514-1517, 2013
3772013
Genome Sequencing and Analysis of the Tasmanian Devil and Its Transmissible Cancer
EP Murchison, OB Schulz-Trieglaff, Z Ning, LB Alexandrov, MJ Bauer, ...
Cell 148 (4), 780-791, 2012
3542012
Establishment and lineage dynamics of the SARS-CoV-2 epidemic in the UK
L Du Plessis, JT McCrone, AE Zarebski, V Hill, C Ruis, B Gutierrez, ...
Science 371 (6530), 708-712, 2021
3452021
Shedding of SARS-CoV-2 in feces and urine and its potential role in person-to-person transmission and the environment-based spread of COVID-19
DL Jones, MQ Baluja, DW Graham, A Corbishley, JE McDonald, ...
Science of the Total Environment 749, 141364, 2020
3322020
SARS-CoV-2 within-host diversity and transmission
KA Lythgoe, M Hall, L Ferretti, M de Cesare, G MacIntyre-Cockett, ...
Science 372 (6539), eabg0821, 2021
2602021
Salmonella bongori Provides Insights into the Evolution of the Salmonellae
M Fookes, GN Schroeder, GC Langridge, CJ Blondel, C Mammina, ...
PLoS pathogens 7 (8), e1002191, 2011
2502011
Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020
E Alm, EK Broberg, T Connor, EB Hodcroft, AB Komissarov, ...
Eurosurveillance 25 (32), 2001410, 2020
2432020
Intercontinental dissemination of azithromycin-resistant shigellosis through sexual transmission: a cross-sectional study
KS Baker, TJ Dallman, PM Ashton, M Day, G Hughes, PD Crook, ...
The Lancet infectious diseases 15 (8), 913-921, 2015
2412015
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