Cymon J. Cox
Cymon J. Cox
CCMAR, UALG
Verified email at ualg.pt
TitleCited byYear
Biopython: freely available Python tools for computational molecular biology and bioinformatics
PJA Cock, T Antao, JT Chang, BA Chapman, CJ Cox, A Dalke, I Friedberg, ...
Bioinformatics 25 (11), 1422-1423, 2009
17752009
Reconstructing the early evolution of Fungi using a six-gene phylogeny
TY James, F Kauff, CL Schoch, PB Matheny, V Hofstetter, CJ Cox, G Celio, ...
Nature 443 (7113), 818, 2006
15702006
Assembling the fungal tree of life: progress, classification, and evolution of subcellular traits
F Lutzoni, F Kauff, CJ Cox, D McLaughlin, G Celio, B Dentinger, ...
American journal of botany 91 (10), 1446-1480, 2004
7192004
An archaeal origin of eukaryotes supports only two primary domains of life
TA Williams, PG Foster, CJ Cox, TM Embley
Nature 504 (7479), 231, 2013
3322013
The archaebacterial origin of eukaryotes
CJ Cox, PG Foster, RP Hirt, SR Harris, TM Embley
Proceedings of the National Academy of Sciences 105 (51), 20356-20361, 2008
3182008
Moss diversity: a molecular phylogenetic analysis of genera
CJ Cox, B Goffinet, NJ Wickett, SB Boles, AJ Shaw
Phytotaxa 9 (1), 175-195, 2010
154*2010
Evolution of the major moss lineages: phylogenetic analyses based on multiple gene sequences and morphology
AE Newton, CJ Cox, JG Duckett, JA Wheeler, B Goffinet, TAJ Hedderson, ...
Bryologist, 187-211, 2000
1542000
Chloroplast phylogeny of asplenioid ferns based on rbcL and trnL-F spacer sequences (Polypodiidae, Aspleniaceae) and its implications for biogeography
H Schneider, SJ Russell, CJ Cox, F Bakker, S Henderson, F Rumsey, ...
Systematic Botany 29 (2), 260-274, 2004
1462004
A congruent phylogenomic signal places eukaryotes within the Archaea
TA Williams, PG Foster, TMW Nye, CJ Cox, TM Embley
Proceedings of the Royal Society B: Biological Sciences 279 (1749), 4870-4879, 2012
1322012
Conflicting phylogenies for early land plants are caused by composition biases among synonymous substitutions
CJ Cox, B Li, PG Foster, TM Embley, P Civáň
Systematic Biology 63 (2), 272-279, 2014
1282014
Phylogeny and evolution of medical species of Candida and related taxa: a multigenic analysis
S Diezmann, CJ Cox, G Schönian, RJ Vilgalys, TG Mitchell
Journal of clinical microbiology 42 (12), 5624-5635, 2004
1282004
Polarity of peatmoss (Sphagnum) evolution: who says bryophytes have no roots?
AJ Shaw, CJ Cox, SB Boles
American journal of botany 90 (12), 1777-1787, 2003
1272003
Phylogenetic relationships among the mosses based on heterogeneous Bayesian analysis of multiple genes from multiple genomic compartments
CJ Cox, B Goffinet, AJ Shaw, SB Boles
Systematic Botany 29 (2), 234-250, 2004
1192004
Phylogenetic evidence of a rapid radiation of pleurocarpous mosses (Bryophyta)
AJ Shaw, CJ Cox, B Goffinet, WR Buck, SB Boles
Evolution 57 (10), 2226-2241, 2003
1182003
The Bryophyta (mosses): systematic and evolutionary inferences from an rps4 gene (cpDNA) phylogeny
B Goffinet, CJ Cox, AJ Shaw, TAJ Hedderson
Annals of botany 87 (2), 191-208, 2001
1132001
Phylogenetic relationships among the diplolepideous-alternate mosses (Bryidae) inferred from nuclear and chloroplast DNA sequences
CJ Cox, B Goffinet, AE Newton, AJ Shaw, TAJ Hedderson
Bryologist, 224-241, 2000
1072000
Phylogenetic relationships among the ciliate arthrodontous mosses: evidence from chloroplast and nuclear DNA sequences
CJ Cox, TAJ Hedderson
Plant Systematics and Evolution 215 (1-4), 119-139, 1999
1061999
Three geographically separate domestications of Asian rice
P Civáň, H Craig, CJ Cox, TA Brown
Nature plants 1 (11), 15164, 2015
1012015
The primary divisions of life: a phylogenomic approach employing composition-heterogeneous methods
PG Foster, CJ Cox, TM Embley
Philosophical Transactions of the Royal Society B: Biological Sciences 364 …, 2009
1012009
Phylogeny and morphological evolution of the Amblystegiaceae (Bryopsida)
A Vanderpoorten, L Hedenäs, CJ Cox, AJ Shaw
Molecular phylogenetics and evolution 23 (1), 1-21, 2002
952002
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Articles 1–20