ian walsh
ian walsh
Bioprocessing technology institute
Verified email at bti.a-star.edu.sg
Title
Cited by
Cited by
Year
ESpritz: accurate and fast prediction of protein disorder
I Walsh, AJM Martin, T Di Domenico, SCE Tosatto
Bioinformatics 28 (4), 503-509, 2012
2662012
PASTA 2.0: an improved server for protein aggregation prediction
I Walsh, F Seno, SCE Tosatto, A Trovato
Nucleic acids research 42 (W1), W301-W307, 2014
1762014
MobiDB 2.0: an improved database of intrinsically disordered and mobile proteins
E Potenza, TD Domenico, I Walsh, SCE Tosatto
Nucleic acids research 43 (D1), D315-D320, 2015
1592015
MobiDB: a comprehensive database of intrinsic protein disorder annotations
T Di Domenico, I Walsh, AJM Martin, SCE Tosatto
Bioinformatics 28 (15), 2080-2081, 2012
1242012
Comprehensive large-scale assessment of intrinsic protein disorder
I Walsh, M Giollo, T Di Domenico, C Ferrari, O Zimmermann, SCE Tosatto
Bioinformatics 31 (2), 201-208, 2015
1152015
A two-stage approach for improved prediction of residue contact maps
A Vullo, I Walsh, G Pollastri
BMC bioinformatics 7 (1), 180, 2006
1022006
RING: networking interacting residues, evolutionary information and energetics in protein structures
AJM Martin, M Vidotto, F Boscariol, T Di Domenico, I Walsh, SCE Tosatto
Bioinformatics 27 (14), 2003-2005, 2011
1012011
Distill: a suite of web servers for the prediction of one-, two-and three-dimensional structural features of proteins
D Baś, AJM Martin, C Mooney, A Vullo, I Walsh, G Pollastri
BMC bioinformatics 7 (1), 402, 2006
912006
CSpritz: accurate prediction of protein disorder segments with annotation for homology, secondary structure and linear motifs
I Walsh, AJM Martin, T Di Domenico, A Vullo, G Pollastri, SCE Tosatto
Nucleic acids research 39 (suppl_2), W190-W196, 2011
772011
NeEMO: a method using residue interaction networks to improve prediction of protein stability upon mutation
M Giollo, AJM Martin, I Walsh, C Ferrari, SCE Tosatto
BMC genomics 15 (4), S7, 2014
602014
RepeatsDB: a database of tandem repeat protein structures
T Di Domenico, E Potenza, I Walsh, R Gonzalo Parra, M Giollo, ...
Nucleic acids research 42 (D1), D352-D357, 2014
532014
Ab initio and template-based prediction of multi-class distance maps by two-dimensional recursive neural networks
I Walsh, D Bał, AJM Martin, C Mooney, A Vullo, G Pollastri
BMC structural biology 9 (1), 5, 2009
482009
Bluues server: electrostatic properties of wild-type and mutated protein structures
I Walsh, G Minervini, A Corazza, G Esposito, SCE Tosatto, F Fogolari
Bioinformatics 28 (16), 2189-2190, 2012
472012
MOBI: a web server to define and visualize structural mobility in NMR protein ensembles
AJM Martin, I Walsh, SCE Tosatto
Bioinformatics 26 (22), 2916-2917, 2010
412010
Correct machine learning on protein sequences: a peer-reviewing perspective
I Walsh, G Pollastri, SCE Tosatto
Briefings in bioinformatics 17 (5), 831-840, 2016
322016
Toward an accurate prediction of inter-residue distances in proteins using 2D recursive neural networks
P Kukic, C Mirabello, G Tradigo, I Walsh, P Veltri, G Pollastri
BMC bioinformatics 15 (1), 6, 2014
302014
FELLS: fast estimator of latent local structure
D Piovesan, I Walsh, G Minervini, SCE Tosatto
Bioinformatics 33 (12), 1889-1891, 2017
282017
RAPHAEL: recognition, periodicity and insertion assignment of solenoid protein structures
I Walsh, FG Sirocco, G Minervini, T Di Domenico, C Ferrari, SCE Tosatto
Bioinformatics 28 (24), 3257-3264, 2012
282012
Analysis and consensus of currently available intrinsic protein disorder annotation sources in the MobiDB database
T Di Domenico, I Walsh, SCE Tosatto
Bmc Bioinformatics 14 (7), S3, 2013
212013
RUBI: rapid proteomic-scale prediction of lysine ubiquitination and factors influencing predictor performance
I Walsh, T Di Domenico, SCE Tosatto
Amino Acids 46 (4), 853-862, 2014
202014
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Articles 1–20