Malachi Griffith
Malachi Griffith
Assistant Professor, Medicine, Washington University School of Medicine
Verified email at wustl.edu - Homepage
TitleCited byYear
The clonal and mutational evolution spectrum of primary triple-negative breast cancers
SP Shah, A Roth, R Goya, A Oloumi, G Ha, Y Zhao, G Turashvili, J Ding, ...
Nature 486 (7403), 395, 2012
14242012
Frequent mutation of histone-modifying genes in non-Hodgkin lymphoma
RD Morin, M Mendez-Lago, AJ Mungall, R Goya, KL Mungall, RD Corbett, ...
Nature 476 (7360), 298, 2011
11852011
Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells
RD Morin, MD O’Connor, M Griffith, F Kuchenbauer, A Delaney, ...
Genome research 18 (4), 610-621, 2008
10522008
Genomic landscape of non-small cell lung cancer in smokers and never-smokers
R Govindan, L Ding, M Griffith, J Subramanian, ND Dees, KL Kanchi, ...
Cell 150 (6), 1121-1134, 2012
8602012
De novo assembly and analysis of RNA-seq data
G Robertson, J Schein, R Chiu, R Corbett, M Field, SD Jackman, ...
Nature methods 7 (11), 909, 2010
7742010
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
DS Gerhard, L Wagner, EA Feingold, CM Shenmen, LH Grouse, ...
Genome research 14 (10B), 2121-2127, 2004
4812004
deFuse: an algorithm for gene fusion discovery in tumor RNA-Seq data
A McPherson, F Hormozdiari, A Zayed, R Giuliany, G Ha, MGF Sun, ...
PLoS computational biology 7 (5), e1001138, 2011
4232011
Alternative expression analysis by RNA sequencing
M Griffith, OL Griffith, J Mwenifumbo, R Goya, AS Morrissy, RD Morin, ...
Nature methods 7 (10), 843, 2010
2892010
DGIdb: mining the druggable genome
M Griffith, OL Griffith, AC Coffman, JV Weible, JF McMichael, NC Spies, ...
Nature methods 10 (12), 1209, 2013
2872013
Functional heterogeneity of genetically defined subclones in acute myeloid leukemia
JM Klco, DH Spencer, CA Miller, M Griffith, TL Lamprecht, M O’Laughlin, ...
Cancer cell 25 (3), 379-392, 2014
2562014
Convergent loss of PTEN leads to clinical resistance to a PI (3) Kα inhibitor
D Juric, P Castel, M Griffith, OL Griffith, HH Won, H Ellis, SH Ebbesen, ...
Nature 518 (7538), 240, 2015
2462015
ORegAnno: an open-access community-driven resource for regulatory annotation
OL Griffith, SB Montgomery, B Bernier, B Chu, K Kasaian, S Aerts, ...
Nucleic acids research 36 (suppl_1), D107-D113, 2007
2462007
SciClone: inferring clonal architecture and tracking the spatial and temporal patterns of tumor evolution
CA Miller, BS White, ND Dees, M Griffith, JS Welch, OL Griffith, R Vij, ...
PLoS computational biology 10 (8), e1003665, 2014
2392014
Novel avian influenza H7N3 strain outbreak, British Columbia
M Hirst, CR Astell, M Griffith, SM Coughlin, M Moksa, T Zeng, DE Smailus, ...
Emerging infectious diseases 10 (12), 2192, 2004
2302004
Association between mutation clearance after induction therapy and outcomes in acute myeloid leukemia
JM Klco, CA Miller, M Griffith, A Petti, DH Spencer, S Ketkar-Kulkarni, ...
Jama 314 (8), 811-822, 2015
1972015
Modeling precision treatment of breast cancer
A Daemen, OL Griffith, LM Heiser, NJ Wang, OM Enache, Z Sanborn, ...
Genome biology 14 (10), R110, 2013
1852013
In-depth characterization of the microRNA transcriptome in a leukemia progression model
F Kuchenbauer, RD Morin, B Argiropoulos, I Petriv, M Griffith, M Heuser, ...
Genome research 18 (11), 1787-1797, 2008
1852008
DGIdb 2.0: mining clinically relevant drug–gene interactions
AH Wagner, AC Coffman, BJ Ainscough, NC Spies, ZL Skidmore, ...
Nucleic acids research 44 (D1), D1036-D1044, 2015
1752015
Analysis of the prostate cancer cell line LNCaP transcriptome using a sequencing-by-synthesis approach
MN Bainbridge, RL Warren, M Hirst, T Romanuik, T Zeng, A Go, ...
BMC genomics 7 (1), 246, 2006
1722006
Evolution of an adenocarcinoma in response to selection by targeted kinase inhibitors
SJM Jones, J Laskin, YY Li, OL Griffith, J An, M Bilenky, YS Butterfield, ...
Genome biology 11 (8), R82, 2010
1562010
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Articles 1–20