Marius Pachitariu
Marius Pachitariu
group leader @ HHMI Janelia
Verified email at janelia.hhmi.org - Homepage
TitleCited byYear
Fully integrated silicon probes for high-density recording of neural activity
JJ Jun, NA Steinmetz, JH Siegle, DJ Denman, M Bauza, B Barbarits, ...
Nature 551 (7679), 232, 2017
2932017
Learning enhances sensory and multiple non-sensory representations in primary visual cortex
J Poort, AG Khan, M Pachitariu, A Nemri, I Orsolic, J Krupic, M Bauza, ...
Neuron 86 (6), 1478-1490, 2015
1512015
Kilosort: realtime spike-sorting for extracellular electrophysiology with hundreds of channels
M Pachitariu, N Steinmetz, S Kadir, M Carandini, KD Harris
BioRxiv, 061481, 2016
121*2016
State-dependent population coding in primary auditory cortex
M Pachitariu, DR Lyamzin, M Sahani, NA Lesica
Journal of Neuroscience 35 (5), 2058-2073, 2015
802015
Extracting regions of interest from biological images with convolutional sparse block coding
M Pachitariu, AM Packer, N Pettit, H Dalgleish, M Hausser, M Sahani
Advances in Neural Information Processing Systems, 1745-1753, 2013
672013
Suite2p: beyond 10,000 neurons with standard two-photon microscopy
M Pachitariu, C Stringer, M Dipoppa, S Schröder, LF Rossi, H Dalgleish, ...
Biorxiv, 061507, 2017
65*2017
Spontaneous behaviors drive multidimensional, brainwide activity
C Stringer, M Pachitariu, N Steinmetz, CB Reddy, M Carandini, KD Harris
Science 364 (6437), 255, 2019
64*2019
Vision and locomotion shape the interactions between neuron types in mouse visual cortex
M Dipoppa, A Ranson, M Krumin, M Pachitariu, M Carandini, KD Harris
Neuron 98 (3), 602-615. e8, 2018
61*2018
Inhibitory control of correlated intrinsic variability in cortical networks
C Stringer, M Pachitariu, NA Steinmetz, M Okun, P Bartho, KD Harris, ...
Elife 5, e19695, 2016
442016
Regularization and nonlinearities for neural language models: when are they needed?
M Pachitariu, M Sahani
arXiv preprint arXiv:1301.5650, 2013
342013
Community-based benchmarking improves spike rate inference from two-photon calcium imaging data
P Berens, J Freeman, T Deneux, N Chenkov, T McColgan, A Speiser, ...
PLoS computational biology 14 (5), e1006157, 2018
282018
Robustness of spike deconvolution for neuronal calcium imaging
M Pachitariu, C Stringer, KD Harris
Journal of Neuroscience 38 (37), 7976-7985, 2018
21*2018
High-dimensional geometry of population responses in visual cortex
C Stringer, M Pachitariu, N Steinmetz, M Carandini, KD Harris
Nature, 1, 2019
13*2019
Thirst regulates motivated behavior through modulation of brainwide neural population dynamics
WE Allen, MZ Chen, N Pichamoorthy, RH Tien, M Pachitariu, L Luo, ...
Science 364 (6437), 253-253, 2019
132019
Learning visual motion in recurrent neural networks
M Pachitariu, M Sahani
Advances in Neural Information Processing Systems, 1322-1330, 2012
112012
Recurrent linear models of simultaneously-recorded neural populations
M Pachitariu, B Petreska, M Sahani
Advances in neural information processing systems, 3138-3146, 2013
102013
Computational processing of neural recordings from calcium imaging data
C Stringer, M Pachitariu
Current opinion in neurobiology 55, 22-31, 2019
82019
Retinal outputs depend on behavioural state
S Schröder, NA Steinmetz, M Krumin, M Pachitariu, M Rizzi, L Lagnado, ...
bioRxiv, 638049, 2019
12019
High precision coding in mouse visual cortex
C Stringer, M Michaelos, M Pachitariu
bioRxiv, 679324, 2019
2019
Neural dynamics in cortical populations
M Pachitariu
UCL (University College London), 2015
2015
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Articles 1–20