Joaquín Otón
Joaquín Otón
Laboratory of Molecular Biology - MRC
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Scipion: A software framework toward integration, reproducibility and validation in 3D electron microscopy
JM De la Rosa-Trevín, A Quintana, L Del Cano, A Zaldívar, I Foche, ...
Journal of structural biology 195 (1), 93-99, 2016
Structures and distributions of SARS-CoV-2 spike proteins on intact virions
Z Ke, J Oton, K Qu, M Cortese, V Zila, L McKeane, T Nakane, J Zivanov, ...
Nature 588 (7838), 498-502, 2020
Xmipp 3.0: an improved software suite for image processing in electron microscopy
JM De la Rosa-Trevín, J Otón, R Marabini, A Zaldivar, J Vargas, ...
Journal of structural biology 184 (2), 321-328, 2013
MonoRes: automatic and accurate estimation of local resolution for electron microscopy maps
JL Vilas, J Gómez-Blanco, P Conesa, R Melero, JM de la Rosa-Trevín, ...
Structure 26 (2), 337-344. e4, 2018
Multipoint phase calibration for improved compensation of inherent wavefront distortion in parallel aligned liquid crystal on silicon displays
J Otón, P Ambs, MS Millán, E Pérez-Cabré
Applied optics 46 (23), 5667-5679, 2007
A pattern matching approach to the automatic selection of particles from low-contrast electron micrographs
V Abrishami, A Zaldívar-Peraza, JM de la Rosa-Trevín, J Vargas, J Otón, ...
Bioinformatics 29 (19), 2460-2468, 2013
Dynamic compensation of chromatic aberration in a programmable diffractive lens
MS Millán, J Otón, E Pérez-Cabré
Optics Express 14 (20), 9103-9112, 2006
Chromatic compensation of programmable Fresnel lenses
MS Millán, J Otón, E Pérez-Cabré
Optics express 14 (13), 6226-6242, 2006
Image formation in cellular X-ray microscopy
J Oton, COS Sorzano, E Pereiro, J Cuenca-Alba, R Navarro, JM Carazo, ...
Journal of structural biology 178 (1), 29-37, 2012
A review of resolution measures and related aspects in 3D Electron Microscopy
COS Sorzano, J Vargas, J Otón, V Abrishami, JM De La Rosa-Trevin, ...
Progress in biophysics and molecular biology 124, 1-30, 2017
FASTDEF: fast defocus and astigmatism estimation for high-throughput transmission electron microscopy
J Vargas, J Otón, R Marabini, S Jonic, JM De La Rosa-Trevín, JM Carazo, ...
Journal of structural biology 181 (2), 136-148, 2013
Intracellular nanoparticles mass quantification by near-edge absorption soft X-ray nanotomography
JJ Conesa, J Otón, M Chiappi, JM Carazo, E Pereiro, FJ Chichón, ...
Scientific reports 6 (1), 1-6, 2016
Characterization of transfer function, resolution and depth of field of a soft X-ray microscope applied to tomography enhancement by Wiener deconvolution
J Otón, E Pereiro, AJ Pérez-Berná, L Millach, COS Sorzano, R Marabini, ...
Biomedical optics express 7 (12), 5092-5103, 2016
Structures, conformations and distributions of SARS-CoV-2 spike protein trimers on intact virions
Z Ke, J Oton, K Qu, M Cortese, V Zila, L McKeane, T Nakane, J Zivanov, ...
bioRxiv, 2020
Three-dimensional reconstruction methods in Single Particle Analysis from transmission electron microscopy data
JM Carazo, COS Sorzano, J Otón, R Marabini, J Vargas
Archives of biochemistry and biophysics 581, 39-48, 2015
Fast and accurate conversion of atomic models into electron density maps
OSS Carlos, V Javier, O Joaquín, A Vahid, MRT José, FA Alejandro, ...
AIMS Biophysics 2 (1), 8-20, 2015
Frozen‐hydrated chromatin from metaphase chromosomes has an interdigitated multilayer structure
A Chicano, E Crosas, J Otón, R Melero, BD Engel, JR Daban
The EMBO journal 38 (7), e99769, 2019
A statistical approach to the initial volume problem in single particle analysis by electron microscopy
COS Sorzano, J Vargas, JM de la Rosa-Trevin, J Oton, ...
Journal of structural biology 189 (3), 213-219, 2015
Measurement of the modulation transfer function of an X-ray microscope based on multiple Fourier orders analysis of a Siemens star
J Otón, COS Sorzano, R Marabini, E Pereiro, JM Carazo
Optics express 23 (8), 9567-9572, 2015
Particle alignment reliability in single particle electron cryomicroscopy: a general approach
J Vargas, J Otón, R Marabini, JM Carazo, COS Sorzano
Scientific reports 6 (1), 1-11, 2016
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Articles 1–20