| The library of integrated network-based cellular signatures NIH program: system-level cataloging of human cells response to perturbations AB Keenan, SL Jenkins, KM Jagodnik, S Koplev, E He, D Torre, Z Wang, ... Cell systems 6 (1), 13-24, 2018 | 390 | 2018 |
| Data Portal for the Library of Integrated Network-based Cellular Signatures (LINCS) program: integrated access to diverse large-scale cellular perturbation response data A Koleti, R Terryn, V Stathias, C Chung, DJ Cooper, JP Turner, D Vidović, ... Nucleic acids research 46 (D1), D558-D566, 2018 | 168 | 2018 |
| LINCS Data Portal 2.0: next generation access point for perturbation-response signatures V Stathias, J Turner, A Koleti, D Vidovic, D Cooper, M Fazel-Najafabadi, ... Nucleic acids research 48 (D1), D431-D439, 2020 | 131 | 2020 |
| TCRD and Pharos 2021: mining the human proteome for disease biology TK Sheils, SL Mathias, KJ Kelleher, VB Siramshetty, DT Nguyen, ... Nucleic Acids Research 49 (D1), D1334-D1346, 2021 | 115 | 2021 |
| Evolving BioAssay Ontology (BAO): modularization, integration and applications S Abeyruwan, UD Vempati, H Küçük-McGinty, U Visser, A Koleti, A Mir, ... Journal of biomedical semantics 5, 1-22, 2014 | 96 | 2014 |
| Large-scale integration of small molecule-induced genome-wide transcriptional responses, Kinome-wide binding affinities and cell-growth inhibition profiles reveal global trends … D Vidović, A Koleti, SC Schürer Frontiers in genetics 5, 112174, 2014 | 91 | 2014 |
| Metadata standard and data exchange specifications to describe, model, and integrate complex and diverse high-throughput screening data from the library of integrated network … UD Vempati, C Chung, C Mader, A Koleti, N Datar, D Vidović, D Wrobel, ... Journal of biomolecular screening 19 (5), 803-816, 2014 | 83 | 2014 |
| Drug target ontology to classify and integrate drug discovery data Y Lin, S Mehta, H Küçük-McGinty, JP Turner, D Vidovic, M Forlin, A Koleti, ... Journal of biomedical semantics 8, 1-16, 2017 | 75 | 2017 |
| Connecting omics signatures of diseases, drugs, and mechanisms of actions with iLINCS M Pilarczyk, M Kouril, B Shamsaei, J Vasiliauskas, W Niu, N Mahi, ... BioRxiv, 826271, 2019 | 41 | 2019 |
| GPCR ontology: development and application of a G protein-coupled receptor pharmacology knowledge framework MJ Przydzial, B Bhhatarai, A Koleti, U Vempati, SC Schürer Bioinformatics 29 (24), 3211-3219, 2013 | 41 | 2013 |
| Connecting omics signatures and revealing biological mechanisms with iLINCS M Pilarczyk, M Fazel-Najafabadi, M Kouril, B Shamsaei, J Vasiliauskas, ... Nature communications 13 (1), 4678, 2022 | 34 | 2022 |
| Sustainable data and metadata management at the BD2K-LINCS Data Coordination and Integration Center V Stathias, A Koleti, D Vidović, DJ Cooper, KM Jagodnik, R Terryn, ... Scientific data 5 (1), 1-14, 2018 | 28 | 2018 |
| BAOSearch: a semantic web application for biological screening and drug discovery research S Abeyruwan, C Chung, N Datar, F Gayanilo, A Koleti, V Lemmon, ... Semantic Web Challenge, 9th International Semantic Web Conference (ISWC), 2010 | 4 | 2010 |
| Bioassay Ontology to Describe High-Throughput Screening Assays and their Results. U Vempati, U Visser, S Abeyruwan, K Sakurai, M Przydzial, C Chung, ... ICBO, 2011 | 2 | 2011 |
| Building Concordant Ontologies for Drug Discovery. H Küçük-McGinty, S Mehta, Y Lin, N Nabizadeh, V Stathias, D Vidovic, ... ICBO/BioCreative, 2016 | 1 | 2016 |
| Data standards, formal ontologies and software tools to facilitate integration, classification and modeling of drug discovery data S Schurer, J Zheng, J Turner, A Koleti ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 256, 2018 | | 2018 |
| FAIR LINCS Data and Metadata powered by the CEDAR Framework A Koleti, RS Gonçalves, V Stathias, M Forlin, W Niu, C Monteiro, ... AHM BD2k 2016, 2016 | | 2016 |
| The LINCS Data Portal and FAIR LINCS Dataset Landing Pages S Schürer, A Koleti, V Stathias, R Terryn, M Forlin, D Vidović, C Chung, ... AHM BD2k 2016, 2016 | | 2016 |
| FAIR Dataset Landing Pages, Digital Research Objects, and Software Tools for LINCS and BD2K A Koleti, R Terryn, V Stathias, D Vidović, C Chung, M Forlin, W Niu, ... AHM BD2K 2016, 2016 | | 2016 |
| Ontologies for classifying and modeling drug discovery data S Schuerer, AY Lin, S Mehta, HK McGinty, Q Cheng, A Koleti, N Zadeh, ... ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 251, 2016 | | 2016 |
Stephan SchürerUniversity of MiamiVerified email at med.miami.edu
