| Genetic effects on gene expression across human tissues GTEx Consortium Nature 550 (7675), 204-213, 2017 | 1440 | 2017 |
| Dynamic landscape and regulation of RNA editing in mammals MH Tan, Q Li, R Shanmugam, R Piskol, J Kohler, AN Young, KI Liu, ... Nature 550 (7675), 249-254, 2017 | 234 | 2017 |
| Estimation of alternative splicing isoform frequencies from RNA-Seq data M Nicolae, S Mangul, I Măndoiu, A Zelikovsky Algorithms in Bioinformatics, 202-214, 2010 | 221 | 2010 |
| Inferring viral quasispecies spectra from 454 pyrose-quencing reads I Astrovskaya, B Tork, S Mangul, K Westbrooks, I Măndoiu, P Balfe, ... BMC Bioinformatics 12 (Suppl 6), S1, 2011 | 132 | 2011 |
| The GTEx Consortium atlas of genetic regulatory effects across human tissues GTEx Consortium Science 369 (6509), 1318-1330, 2020 | 123 | 2020 |
| Co-expression networks reveal the tissue-specific regulation of transcription and splicing A Saha, Y Kim, ADH Gewirtz, B Jo, C Gao, IC McDowell, BE Engelhardt, ... Genome research 27 (11), 1843-1858, 2017 | 92 | 2017 |
| Accurate viral population assembly from ultra-deep sequencing data S Mangul, NC Wu, N Mancuso, A Zelikovsky, R Sun, E Eskin Bioinformatics 30 (12), i329-i337, 2014 | 53 | 2014 |
| Systematic benchmarking of omics computational tools S Mangul, LS Martin, BL Hill, AKM Lam, MG Distler, A Zelikovsky, E Eskin, ... Nature communications 10 (1), 1-11, 2019 | 49 | 2019 |
| Local genetic effects on gene expression across 44 human tissues F Aguet, AA Brown, SE Castel, JR Davis, P Mohammadi, AV Segre, ... BiorXiv, 074450, 2016 | 42 | 2016 |
| Transcriptome analysis in whole blood reveals increased microbial diversity in schizophrenia LMO Loohuis, S Mangul, APS Ori, G Jospin, D Koslicki, HT Yang, T Wu, ... Translational psychiatry 8 (1), 1-9, 2018 | 40* | 2018 |
| Identifying cis-mediators for trans-eQTLs across many human tissues using genomic mediation analysis F Yang, J Wang, BL Pierce, LS Chen, F Aguet, KG Ardlie, BB Cummings, ... Genome research 27 (11), 1859-1871, 2017 | 36 | 2017 |
| A comprehensive map of genetic variation in the world’s largest ethnic group—Han Chinese CWK Chiang, S Mangul, C Robles, S Sankararaman Molecular biology and evolution 35 (11), 2736-2750, 2018 | 35 | 2018 |
| Intratumoral CD4+ T Cells Mediate Anti-tumor Cytotoxicity in Human Bladder Cancer DY Oh, SS Kwek, SS Raju, T Li, E McCarthy, E Chow, D Aran, A Ilano, ... Cell, 2020 | 31 | 2020 |
| Improving the usability and archival stability of bioinformatics software S Mangul, LS Martin, E Eskin, R Blekhman Genome biology 20 (1), 1-3, 2019 | 31 | 2019 |
| CRISPR-mediated VHL knockout generates an improved model for metastatic renal cell carcinoma S Schokrpur, J Hu, DL Moughon, P Liu, LC Lin, K Hermann, S Mangul, ... Scientific reports 6, 29032, 2016 | 28 | 2016 |
| Challenges and recommendations to improve the installability and archival stability of omics computational tools S Mangul, T Mosqueiro, RJ Abdill, D Duong, K Mitchell, V Sarwal, B Hill, ... PLoS biology 17 (6), e3000333, 2019 | 26* | 2019 |
| Cell type–specific genetic regulation of gene expression across human tissues S Kim-Hellmuth, F Aguet, M Oliva, M Muņoz-Aguirre, S Kasela, V Wucher, ... Science 369 (6509), 2020 | 25 | 2020 |
| An integer programming approach to novel transcript reconstruction from paired-end RNA-Seq reads S Mangul, A Caciula, S Al Seesi, D Brinza, AR Banday, R Kanadia Proceedings of the ACM Conference on Bioinformatics, Computational Biology …, 2012 | 21 | 2012 |
| ROP: dumpster diving in RNA-sequencing to find the source of 1 trillion reads across diverse adult human tissues S Mangul, HT Yang, N Strauli, F Gruhl, HT Porath, K Hsieh, L Chen, ... Genome biology 19 (1), 1-12, 2018 | 17 | 2018 |
| Long single-molecule reads can resolve the complexity of the influenza virus composed of rare, closely related mutant variants A Artyomenko, NC Wu, S Mangul, E Eskin, R Sun, A Zelikovsky Journal of Computational Biology 24 (6), 558-570, 2017 | 16 | 2017 |
Alexander ZelikovskyGeorgia State UniversityVerified email at cs.gsu.edu
