Paul Wilmes
Paul Wilmes
Associate Professor
Verified email at uni.lu - Homepage
TitleCited byYear
Treg induction by a rationally selected mixture of Clostridia strains from the human microbiota
K Atarashi, T Tanoue, K Oshima, W Suda, Y Nagano, H Nishikawa, ...
Nature 500 (7461), 232, 2013
15432013
A dietary fiber-deprived gut microbiota degrades the colonic mucus barrier and enhances pathogen susceptibility
MS Desai, AM Seekatz, NM Koropatkin, N Kamada, CA Hickey, M Wolter, ...
Cell 167 (5), 1339-1353. e21, 2016
5472016
Metaproteomics: studying functional gene expression in microbial ecosystems
P Wilmes, PL Bond
Trends in microbiology 14 (2), 92-97, 2006
3082006
The application of two‐dimensional polyacrylamide gel electrophoresis and downstream analyses to a mixed community of prokaryotic microorganisms
P Wilmes, PL Bond
Environmental Microbiology 6 (9), 911-920, 2004
3072004
Challenges in microbial ecology: building predictive understanding of community function and dynamics
S Widder, RJ Allen, T Pfeiffer, TP Curtis, C Wiuf, WT Sloan, OX Cordero, ...
The ISME journal 10 (11), 2557, 2016
2682016
Generation of genome-scale metabolic reconstructions for 773 members of the human gut microbiota
S Magnúsdóttir, A Heinken, L Kutt, DA Ravcheev, E Bauer, A Noronha, ...
Nature biotechnology 35 (1), 81, 2017
2292017
Characterization of extracellular polymeric substances from acidophilic microbial biofilms
Y Jiao, GD Cody, AK Harding, P Wilmes, M Schrenk, KE Wheeler, ...
Appl. Environ. Microbiol. 76 (9), 2916-2922, 2010
1712010
Metaproteomics provides functional insight into activated sludge wastewater treatment
P Wilmes, M Wexler, PL Bond
PLoS One 3 (3), e1778, 2008
1702008
Community proteogenomics highlights microbial strain-variant protein expression within activated sludge performing enhanced biological phosphorus removal
P Wilmes, AF Andersson, MG Lefsrud, M Wexler, M Shah, B Zhang, ...
The ISME journal 2 (8), 853, 2008
1692008
A microfluidics-based in vitro model of the gastrointestinal human–microbe interface
P Shah, JV Fritz, E Glaab, MS Desai, K Greenhalgh, A Frachet, ...
Nature communications 7, 11535, 2016
1572016
The complex exogenous RNA spectra in human plasma: an interface with human gut biota?
K Wang, H Li, Y Yuan, A Etheridge, Y Zhou, D Huang, P Wilmes, D Galas
PloS one 7 (12), e51009, 2012
1562012
Proteogenomic basis for ecological divergence of closely related bacteria in natural acidophilic microbial communities
VJ Denef, LH Kalnejais, RS Mueller, P Wilmes, BJ Baker, BC Thomas, ...
Proceedings of the National Academy of Sciences 107 (6), 2383-2390, 2010
1482010
VizBin-an application for reference-independent visualization and human-augmented binning of metagenomic data
CC Laczny, T Sternal, V Plugaru, P Gawron, A Atashpendar, ...
Microbiome 3 (1), 1, 2015
1192015
From meta-omics to causality: experimental models for human microbiome research
JV Fritz, MS Desai, P Shah, JG Schneider, P Wilmes
Microbiome 1 (1), 14, 2013
1072013
The dynamic genetic repertoire of microbial communities
P Wilmes, SL Simmons, VJ Denef, JF Banfield
FEMS microbiology reviews 33 (1), 109-132, 2008
1052008
A decade of metaproteomics: where we stand and what the future holds
P Wilmes, A Heintz‐Buschart, PL Bond
Proteomics 15 (20), 3409-3417, 2015
1042015
Integrated multi-omics of the human gut microbiome in a case study of familial type 1 diabetes
A Heintz-Buschart, P May, CC Laczny, LA Lebrun, C Bellora, A Krishna, ...
Nature microbiology 2 (1), 16180, 2017
952017
Systematic design of 18S rRNA gene primers for determining eukaryotic diversity in microbial consortia
LW Hugerth, EEL Muller, YOO Hu, LAM Lebrun, H Roume, D Lundin, ...
PLoS One 9 (4), e95567, 2014
912014
Natural acidophilic biofilm communities reflect distinct organismal and functional organization
P Wilmes, JP Remis, M Hwang, M Auer, MP Thelen, JF Banfield
The ISME journal 3 (2), 266, 2009
912009
The human gut microbiome in health: establishment and resilience of microbiota over a lifetime
K Greenhalgh, KM Meyer, KM Aagaard, P Wilmes
Environmental microbiology 18 (7), 2103-2116, 2016
872016
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