Ying Xu
Ying Xu
Professor of Biochemistry and Molecular Biology, University of Georgia
Verified email at uga.edu - Homepage
Title
Cited by
Cited by
Year
dbCAN: a web resource for automated carbohydrate-active enzyme annotation
Y Yin, X Mao, J Yang, X Chen, F Mao, Y Xu
Nucleic acids research 40 (W1), W445-W451, 2012
9402012
Activin a efficiently specifies definitive endoderm from human embryonic stem cells only when phosphatidylinositol 3‐kinase signaling is suppressed
AB McLean, KA D'Amour, KL Jones, M Krishnamoorthy, MJ Kulik, ...
Stem cells 25 (1), 29-38, 2007
4702007
Current topics in computational molecular biology
TJMQ Zhang
MIT Press, 2002
469*2002
Mapping Aβ amyloid fibril secondary structure using scanning proline mutagenesis
AD Williams, E Portelius, I Kheterpal, J Guo, KD Cook, Y Xu, R Wetzel
Journal of molecular biology 335 (3), 833-842, 2004
4122004
DOOR: a database for prokaryotic operons
F Mao, P Dam, J Chou, V Olman, Y Xu
Nucleic acids research 37 (suppl_1), D459-D463, 2009
3512009
Clustering gene expression data using a graph-theoretic approach: an application of minimum spanning trees
Y Xu, V Olman, D Xu
Bioinformatics 18 (4), 536-545, 2002
3462002
RAPTOR: optimal protein threading by linear programming
J Xu, M Li, D Kim, Y Xu
Journal of bioinformatics and computational biology 1 (01), 95-117, 2003
3082003
Protein threading using PROSPECT: design and evaluation
Y Xu, D Xu
Proteins: Structure, Function, and Bioinformatics 40 (3), 343-354, 2000
2382000
QUBIC: a qualitative biclustering algorithm for analyses of gene expression data
G Li, Q Ma, H Tang, AH Paterson, Y Xu
Nucleic acids research 37 (15), e101-e101, 2009
2322009
SUMOsp: a web server for sumoylation site prediction
Y Xue, F Zhou, C Fu, Y Xu, X Yao
Nucleic acids research 34 (suppl_2), W254-W257, 2006
2102006
Computational Methods for Protein Structure Prediction and Modeling Volume 1: Basic Characterization
Y Xu, D Xu, J Liang
Springer Science+ Business Media, 2007
188*2007
[16] Discovering and understanding genes in human DNA sequence using GRAIL
EC Uberbacher, Y Xu, RJ Mural
Methods in enzymology 266, 259-281, 1996
1881996
Evaluation of 50-mer oligonucleotide arrays for detecting microbial populations in environmental samples
SM Tiquia, L Wu, SC Chong, S Passovets, D Xu, Y Xu, J Zhou
Biotechniques 36 (4), 664-675, 2004
1862004
Improved peptide elution time prediction for reversed-phase liquid chromatography-MS by incorporating peptide sequence information
K Petritis, LJ Kangas, B Yan, ME Monroe, EF Strittmatter, WJ Qian, ...
Analytical chemistry 78 (14), 5026-5039, 2006
1852006
dbCAN2: a meta server for automated carbohydrate-active enzyme annotation
H Zhang, T Yohe, L Huang, S Entwistle, P Wu, Z Yang, PK Busk, Y Xu, ...
Nucleic acids research 46 (W1), W95-W101, 2018
1822018
Operon prediction using both genome-specific and general genomic information
P Dam, V Olman, K Harris, Z Su, Y Xu
Nucleic acids research 35 (1), 288-298, 2007
1762007
Prediction of functional modules based on comparative genome analysis and Gene Ontology application
H Wu, Z Su, F Mao, V Olman, Y Xu
Nucleic acids research 33 (9), 2822-2837, 2005
1642005
Minimum spanning trees for gene expression data clustering
Y Xu, V Olman, D Xu
Genome Informatics 12, 24-33, 2001
1572001
Recognizing exons in genomic sequence using GRAIL II.
Y Xu, R Mural, M Shah, E Uberbacher
Genetic engineering 16, 241-253, 1994
1511994
An integrated transcriptomic and computational analysis for biomarker identification in gastric cancer
J Cui, Y Chen, WC Chou, L Sun, L Chen, J Suo, Z Ni, M Zhang, X Kong, ...
Nucleic acids research 39 (4), 1197-1207, 2011
1482011
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