Duygu Ucar
Duygu Ucar
Associate Professor, Jackson Laboratory
Verified email at - Homepage
Cited by
Cited by
Transgenerational epigenetic inheritance of longevity in Caenorhabditis elegans
EL Greer, TJ Maures, D Ucar, AG Hauswirth, E Mancini, JP Lim, ...
Nature 479 (7373), 365-371, 2011
An event-based framework for characterizing the evolutionary behavior of interaction graphs
S Asur, S Parthasarathy, D Ucar
ACM Transactions on Knowledge Discovery from Data (TKDD) 3 (4), 1-36, 2009
H3K4me3 breadth is linked to cell identity and transcriptional consistency
BA Benayoun, EA Pollina, D Ucar, S Mahmoudi, K Karra, ED Wong, ...
Cell 158 (3), 673-688, 2014
Sexual-dimorphism in human immune system aging
EJ Márquez, C Chung, R Marches, RJ Rossi, D Nehar-Belaid, A Eroglu, ...
Nature communications 11 (1), 751, 2020
An ensemble framework for clustering protein–protein interaction networks
S Asur, D Ucar, S Parthasarathy
Bioinformatics 23 (13), i29-i40, 2007
A CD4+ T cell population expanded in lupus blood provides B cell help through interleukin-10 and succinate
S Caielli, DT Veiga, P Balasubramanian, S Athale, B Domic, E Murat, ...
Nature medicine 25 (1), 75-81, 2019
Discover regulatory DNA elements using chromatin signatures and artificial neural network
HA Firpi, D Ucar, K Tan
Bioinformatics 26 (13), 1579-1586, 2010
Expansion of oligodendrocyte progenitor cells following SIRT1 inactivation in the adult brain
VA Rafalski, PP Ho, JO Brett, D Ucar, JC Dugas, EA Pollina, LML Chow, ...
Nature cell biology 15 (6), 614-624, 2013
Sestrins induce natural killer function in senescent-like CD8+ T cells
BI Pereira, RPH De Maeyer, LP Covre, D Nehar-Belaid, A Lanna, S Ward, ...
Nature immunology 21 (6), 684-694, 2020
The chromatin accessibility signature of human immune aging stems from CD8+ T cells
D Ucar, EJ Márquez, CH Chung, R Marches, RJ Rossi, A Uyar, TC Wu, ...
Journal of Experimental Medicine 214 (10), 3123-3144, 2017
FOXO3 shares common targets with ASCL1 genome-wide and inhibits ASCL1-dependent neurogenesis
AE Webb, EA Pollina, T Vierbuchen, N Urban, D Ucar, DS Leeman, ...
Cell reports 4 (3), 477-491, 2013
FoxO6 regulates memory consolidation and synaptic function
DAM Salih, AJ Rashid, D Colas, L de la Torre-Ubieta, RP Zhu, AA Morgan, ...
Genes & development 26 (24), 2780-2801, 2012
Markov clustering of protein interaction networks with improved balance and scalability
V Satuluri, S Parthasarathy, D Ucar
Proceedings of the first ACM international conference on bioinformatics and …, 2010
The tandem duplicator phenotype as a distinct genomic configuration in cancer
F Menghi, K Inaki, XY Woo, PA Kumar, KR Grzeda, A Malhotra, V Yadav, ...
Proceedings of the National Academy of Sciences 113 (17), E2373-E2382, 2016
The lethal sex gap: COVID-19
EJ Márquez, J Trowbridge, GA Kuchel, J Banchereau, D Ucar
Immunity & Ageing 17, 1-8, 2020
Combinatorial chromatin modification patterns in the human genome revealed by subspace clustering
D Ucar, Q Hu, K Tan
Nucleic acids research 39 (10), 4063-4075, 2011
Improving functional modularity in protein-protein interactions graphs using hub-induced subgraphs
D Ucar, S Asur, U Catalyurek, S Parthasarathy
European Conference on Principles of Data Mining and Knowledge Discovery …, 2006
Multiomic profiling identifies cis-regulatory networks underlying human pancreatic β cell identity and function
N Lawlor, EJ Marquez, P Orchard, N Narisu, MS Shamim, A Thibodeau, ...
Cell reports 26 (3), 788-801. e6, 2019
Type 2 diabetes–associated genetic variants regulate chromatin accessibility in human islets
S Khetan, R Kursawe, A Youn, N Lawlor, A Jillette, EJ Marquez, D Ucar, ...
Diabetes 67 (11), 2466-2477, 2018
Genomics of islet (dys) function and type 2 diabetes
N Lawlor, S Khetan, D Ucar, ML Stitzel
Trends in Genetics 33 (4), 244-255, 2017
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