| An atlas of active enhancers across human cell types and tissues R Andersson, C Gebhard, I Miguel-Escalada, I Hoof, J Bornholdt, M Boyd, ... Nature 507 (7493), 455, 2014 | 1502 | 2014 |
| A promoter-level mammalian expression atlas ARR Forrest, H Kawaji, M Rehli, JK Baillie, MJL De Hoon, V Haberle, ... Nature 507 (7493), 462, 2014 | 807 | 2014 |
| Role of the Hog1 Stress-activated Protein Kinase in the Global Transcriptional Response to Stress in the Fungal Pathogen Candida albicans B Enjalbert, DA Smith, MJ Cornell, I Alam, S Nicholls, AJP Brown, J Quinn Molecular biology of the cell 17 (2), 1018-1032, 2006 | 345 | 2006 |
| Comparative genome analysis of filamentous fungi reveals gene family expansions associated with fungal pathogenesis DM Soanes, I Alam, M Cornell, HM Wong, C Hedeler, NW Paton, ... PLoS One 3 (6), e2300, 2008 | 173 | 2008 |
| Comparative genome analysis across a kingdom of eukaryotic organisms: specialization and diversification in the fungi MJ Cornell, I Alam, DM Soanes, HM Wong, C Hedeler, NW Paton, ... Genome Research 17 (12), 1809-1822, 2007 | 95 | 2007 |
| Differential roles of epigenetic changes and Foxp3 expression in regulatory T cell-specific transcriptional regulation H Morikawa, N Ohkura, A Vandenbon, M Itoh, S Nagao-Sato, H Kawaji, ... Proceedings of the National Academy of Sciences 111 (14), 5289-5294, 2014 | 92 | 2014 |
| Toward an understanding of the molecular mechanisms of barnacle larval settlement: a comparative transcriptomic approach ZF Chen, K Matsumura, H Wang, SM Arellano, X Yan, I Alam, JAC Archer, ... PLoS One 6 (7), e22913, 2011 | 71 | 2011 |
| INDIGO–INtegrated Data Warehouse of MIcrobial GenOmes with examples from the red sea extremophiles I Alam, A Antunes, AA Kamau, M Kalkatawi, U Stingl, VB Bajic PloS one 8 (12), e82210, 2013 | 68 | 2013 |
| Rhizosphere microbiome metagenomics of gray mangroves (Avicennia marina) in the Red Sea H Alzubaidy, M Essack, TB Malas, A Bokhari, O Motwalli, FK Kamanu, ... Gene 576 (2), 626-636, 2016 | 65 | 2016 |
| Comparative genomics reveals adaptations of a halotolerant thaumarchaeon in the interfaces of brine pools in the Red Sea DK Ngugi, J Blom, I Alam, M Rashid, W Ba-Alawi, G Zhang, T Hikmawan, ... The ISME journal 9 (2), 396, 2015 | 50 | 2015 |
| Metabolic traits of an uncultured archaeal lineage-MSBL1-from brine pools of the Red Sea R Mwirichia, I Alam, M Rashid, M Vinu, W Ba-Alawi, AA Kamau, DK Ngugi, ... Scientific reports 6, 19181, 2016 | 43 | 2016 |
| e-Fungi: a data resource for comparative analysis of fungal genomes H Cornelia, W Han, C Michael, A Intikhab, R Magnus, H Simon, ... BMC Genomics 8, 2007 | 43* | 2007 |
| Soil and rhizosphere associated fungi in gray mangroves (Avicennia marina) from the Red Sea—a metagenomic approach MF Simőes, A Antunes, CA Ottoni, MS Amini, I Alam, H Alzubaidy, ... Genomics, proteomics & bioinformatics 13 (5), 310-320, 2015 | 33 | 2015 |
| Insights into the Transcriptional Architecture of Behavioral Plasticity in the Honey Bee Apis mellifera AM Khamis, AR Hamilton, YA Medvedeva, T Alam, I Alam, M Essack, ... Scientific reports 5, 11136, 2015 | 32 | 2015 |
| Aerobic methanotrophic communities at the Red Sea brine-seawater interface RZ Abdallah, M Adel, A Ouf, A Sayed, MA Ghazy, I Alam, M Essack, ... Frontiers in microbiology 5, 487, 2014 | 30 | 2014 |
| Genome sequence of Halorhabdus tiamatea, the first archaeon isolated from a deep-sea anoxic brine lake A Antunes, I Alam, VB Bajic, U Stingl Journal of bacteriology 193 (17), 4553-4554, 2011 | 26 | 2011 |
| Genome sequence of Haloplasma contractile, an unusual contractile bacterium from a deep-sea anoxic brine lake A Antunes, I Alam, H El Dorry, R Siam, A Robertson, VB Bajic, U Stingl Journal of bacteriology 193 (17), 4551-4552, 2011 | 23 | 2011 |
| Complete genome sequence analysis of Enterobacter sp. SA187, a plant multi-stress tolerance promoting endophytic bacterium C Andrés-Barrao, FF Lafi, I Alam, A De Zélicourt, AA Eida, A Bokhari, ... Frontiers in microbiology 8, 2023, 2017 | 22 | 2017 |
| Comparative homology agreement search: An effective combination of homology-search methods I Alam, A Dress, M Rehmsmeier, G Fuellen Proceedings of the National Academy of Sciences 101 (38), 13814-13819, 2004 | 22 | 2004 |
| Comprehensive genomic analyses of the OM43 clade, including a novel species from the Red Sea, indicate ecotype differentiation among marine methylotrophs F Jimenez-Infante, DK Ngugi, M Vinu, I Alam, AA Kamau, J Blom, VB Bajic, ... Appl. Environ. Microbiol. 82 (4), 1215-1226, 2016 | 18 | 2016 |
Ulrich StinglAsst Professor for Microbial Ecology, University of FloridaVerified email at ufl.edu
