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Dénes Türei
Dénes Türei
Heidelberg University, Uniklinik RWTH Aachen, EMBL Heidelberg
Verified email at embl.de - Homepage
Title
Cited by
Cited by
Year
Benchmark and integration of resources for the estimation of human transcription factor activities
L Garcia-Alonso, CH Holland, MM Ibrahim, D Turei, J Saez-Rodriguez
Genome research 29 (8), 1363-1375, 2019
5902019
OmniPath: guidelines and gateway for literature-curated signaling pathway resources
D Türei, T Korcsmáros, J Saez-Rodriguez
Nature methods 13 (12), 966-967, 2016
4572016
SignaLink 2–a signaling pathway resource with multi-layered regulatory networks
D Fazekas, M Koltai, D Türei, D Módos, M Pálfy, Z Dúl, L Zsákai, ...
BMC systems biology 7 (1), 1-15, 2013
2182013
Integrated intra‐and intercellular signaling knowledge for multicellular omics analysis
D Türei, A Valdeolivas, L Gul, N Palacio‐Escat, M Klein, O Ivanova, ...
Molecular systems biology 17 (3), e9923, 2021
1652021
Comparison of methods and resources for cell-cell communication inference from single-cell RNA-Seq data
D Dimitrov, D Türei, M Garrido-Rodriguez, PL Burmedi, JS Nagai, C Boys, ...
Nature communications 13 (1), 3224, 2022
164*2022
The NRF2-related interactome and regulome contain multifunctional proteins and fine-tuned autoregulatory loops
D Papp, K Lenti, D Módos, D Fazekas, Z Dúl, D Türei, L Földvári-Nagy, ...
FEBS letters 586 (13), 1795-1802, 2012
1292012
Adipocyte-secreted BMP8b mediates adrenergic-induced remodeling of the neuro-vascular network in adipose tissue
V Pellegrinelli, VJ Peirce, L Howard, S Virtue, D Türei, M Senzacqua, ...
Nature Communications 9 (1), 4974, 2018
1222018
Complex regulation of autophagy in cancer–Integrated approaches to discover the networks that hold a double-edged sword
J Kubisch, D Türei, L Földvári-Nagy, ZA Dunai, L Zsákai, M Varga, T Vellai, ...
Seminars in cancer biology 23 (4), 252-261, 2013
1142013
Autophagy Regulatory Network—A systems-level bioinformatics resource for studying the mechanism and regulation of autophagy
D Türei, L Földvári-Nagy, D Fazekas, D Módos, J Kubisch, T Kadlecsik, ...
Autophagy 11 (1), 155-165, 2015
962015
The orchestra of lipid-transfer proteins at the crossroads between metabolism and signaling
A Chiapparino, K Maeda, D Turei, J Saez-Rodriguez, AC Gavin
Progress in lipid research 61, 30-39, 2016
942016
COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms
M Ostaszewski, A Niarakis, A Mazein, I Kuperstein, R Phair, ...
Molecular systems biology 17 (10), e10387, 2021
762021
NRF2-ome: an integrated web resource to discover protein interaction and regulatory networks of NRF2
D Türei, D Papp, D Fazekas, L Földvári-Nagy, D Módos, K Lenti, ...
Oxidative medicine and cellular longevity 2013, 2013
512013
Bringing data from curated pathway resources to Cytoscape with OmniPath
F Ceccarelli, D Turei, A Gabor, J Saez-Rodriguez
Bioinformatics 36 (8), 2632-2633, 2020
342020
Long-term dynamic patterns and diversity of phytoplankton communities in a large eutrophic river (the case of River Danube, Hungary)
L Hufnagel, KT Kiss, C Sipkay, L Gimesi, C Vadadi Fülöp, D Türei
Applied Ecology and Environmental Research 8 (4), 329-349, 2010
332010
Network pharmacology modeling identifies synergistic Aurora B and ZAK interaction in triple-negative breast cancer
J Tang, P Gautam, A Gupta, L He, S Timonen, Y Akimov, W Wang, ...
NPJ systems biology and applications 5 (1), 20, 2019
30*2019
Targets of drugs are generally and targets of drugs having side effects are specifically good spreaders of human interactome perturbations
ÁR Perez-Lopez, KZ Szalay, D Türei, D Módos, K Lenti, T Korcsmáros, ...
Scientific reports 5 (1), 10182, 2015
292015
Weed species composition of small‐scale farmlands bears a strong crop‐related and environmental signature
K Nagy, A Lengyel, A Kovács, D Türei, AM Csergő, G Pinke
Weed Research 58 (1), 46-56, 2018
282018
Open community challenge reveals molecular network modules with key roles in diseases
S Choobdar, ME Ahsen, J Crawford, M Tomasoni, T Fang, D Lamparter, ...
bioRxiv, 265553, 2018
262018
SignaLink3: a multi-layered resource to uncover tissue-specific signaling networks
L Csabai, D Fazekas, T Kadlecsik, M Szalay-Bekő, B Bohár, M Madgwick, ...
Nucleic acids research 50 (D1), D701-D709, 2022
222022
The minimum information about a molecular interaction causal statement (MI2CAST)
V Touré, S Vercruysse, ML Acencio, RC Lovering, S Orchard, G Bradley, ...
Bioinformatics 36 (24), 5712-5718, 2020
182020
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