| A snakemake toolkit for the batch assembly, annotation, and phylogenetic analysis of mitochondrial genomes and ribosomal genes from genome skims of museum collections O White, A Hall, BW Price, ST Williams, M Clark bioRxiv, 2023.08. 11.552985, 2023 | 1 | 2023 |
| Exome capture of Antarctic krill (Euphausia superba) for cost effective population genetics of historical collections O White, G Tarling, L Hughes, S Walkington, MD Clark bioRxiv, 2023.07. 24.550387, 2023 | | 2023 |
| Air-seq: Measuring air metagenomic diversity in an agricultural ecosystem M Giolai, W Verweij, N Pearson, P Nicholson, RM Leggett, MD Clark bioRxiv, 2022.12. 13.520298, 2022 | 4 | 2022 |
| Genomic erosion in a demographically recovered bird species during conservation rescue HA Jackson, L Percival‐Alwyn, C Ryan, MF Albeshr, L Venturi, ... Conservation Biology 36 (4), e13918, 2022 | 14 | 2022 |
| Nanopore adaptive sampling: a tool for enrichment of low abundance species in metagenomic samples S Martin, D Heavens, Y Lan, S Horsfield, MD Clark, RM Leggett Genome biology 23 (1), 11, 2022 | 107 | 2022 |
| How low can you go? Driving down the DNA input requirements for nanopore sequencing D Heavens, D Chooneea, M Giolai, P Cuber, P Aanstad, S Martin, ... bioRxiv, 2021.10. 15.464554, 2021 | 9 | 2021 |
| Analysis of wild plant pathogen populations reveals a signal of adaptation in genes evolving for survival in agriculture in the beet rust pathogen (Uromyces beticola) M McMullan, L Percival-Alwyn, K Sawford, G Kaithakottil, M Grey, ... bioRxiv, 2021.08. 12.456076, 2021 | | 2021 |
| Multiple wheat genomes reveal global variation in modern breeding S Walkowiak, L Gao, C Monat, G Haberer, MT Kassa, J Brinton, ... Nature 588 (7837), 277-283, 2020 | 590 | 2020 |
| Multi-parent populations in crops: a toolbox integrating genomics and genetic mapping with breeding MF Scott, O Ladejobi, S Amer, AR Bentley, J Biernaskie, SA Boden, ... Heredity 125 (6), 396-416, 2020 | 160 | 2020 |
| A low‐cost pipeline for soil microbiome profiling A Bollmann‐Giolai, M Giolai, D Heavens, I Macaulay, J Malone, MD Clark Microbiologyopen 9 (12), e1133, 2020 | 12 | 2020 |
| New approaches for metagenome assembly with short reads M Ayling, MD Clark, RM Leggett Briefings in bioinformatics 21 (2), 584-594, 2020 | 181 | 2020 |
| Rapid MinION profiling of preterm microbiota and antimicrobial-resistant pathogens RM Leggett, C Alcon-Giner, D Heavens, S Caim, TC Brook, M Kujawska, ... Nature microbiology 5 (3), 430-442, 2020 | 157* | 2020 |
| Spatially resolved transcriptomics reveals plant host responses to pathogens M Giolai, W Verweij, A Lister, D Heavens, I Macaulay, MD Clark Plant Methods 15, 1-13, 2019 | 23 | 2019 |
| Semi‐quantitative characterisation of mixed pollen samples using MinION sequencing and Reverse Metagenomics (RevMet) N Peel, LV Dicks, MD Clark, D Heavens, L Percival‐Alwyn, C Cooper, ... Methods in Ecology and Evolution 10 (10), 1690-1701, 2019 | 33 | 2019 |
| A critical comparison of technologies for a plant genome sequencing project P Paajanen, G Kettleborough, E López-Girona, M Giolai, D Heavens, ... Gigascience 8 (3), giy163, 2019 | 53 | 2019 |
| Haplotype Resolving the Genome of Fragaria x Ananassa Using the Basic Sequence Graph Framework RJ Harrison, GAA Garcia, L Yanes, H Bates, A Armitage, M Clark, ... Plant and Animal Genome XXVII Conference (January 12-16, 2019), 2019 | | 2019 |
| Der Zebrafisch als in vivo-Modellsystem für Adipositas und assoziierte Erkrankungen K Landgraf, W Kiess, A Körner Adipositas-Ursachen, Folgeerkrankungen, Therapie 12 (04), 198-203, 2018 | | 2018 |
| Independent assessment and improvement of wheat genome sequence assemblies using Fosill jumping libraries. LFH Lu FuHao, N McKenzie, G Kettleborough, D Heavens, MD Clark, ... | | 2018 |
| Shifting the limits in wheat research and breeding using a fully annotated reference genome International Wheat Genome Sequencing Consortium (IWGSC), R Appels, ... Science 361 (6403), eaar7191, 2018 | 2367 | 2018 |
| The ash dieback invasion of Europe was founded by two genetically divergent individuals M McMullan, M Rafiqi, G Kaithakottil, BJ Clavijo, L Bilham, E Orton, ... Nature Ecology & Evolution 2 (6), 1000-1008, 2018 | 99 | 2018 |
Richard M. LeggettGroup Leader, Earlham InstituteVerified email at earlham.ac.uk
