Michael R. Miller
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Rapid and cost-effective polymorphism identification and genotyping using restriction site associated DNA (RAD) markers
MR Miller, JP Dunham, A Amores, WA Cresko, EA Johnson
Genome research 17 (2), 240-248, 2007
Harnessing the power of RADseq for ecological and evolutionary genomics
KR Andrews, JM Good, MR Miller, G Luikart, PA Hohenlohe
Nature Reviews Genetics 17 (2), 81-92, 2016
Mosaic analysis with double markers reveals tumor cell of origin in glioma
C Liu, JC Sage, MR Miller, RGW Verhaak, S Hippenmeyer, H Vogel, ...
Cell 146 (2), 209-221, 2011
Genotyping-by-sequencing in ecological and conservation genomics
SR Narum, CA Buerkle, JW Davey, MR Miller, PA Hohenlohe
Molecular ecology 22 (11), 2841, 2013
RAD capture (Rapture): flexible and efficient sequence-based genotyping
OA Ali, SM O’Rourke, SJ Amish, MH Meek, G Luikart, C Jeffres, MR Miller
Genetics 202 (2), 389-400, 2016
A conserved haplotype controls parallel adaptation in geographically distant salmonid populations
MR Miller, JP Brunelli, PA Wheeler, S Liu, CE REXROAD III, Y Palti, ...
Molecular ecology 21 (2), 237-249, 2012
TU-tagging: cell type–specific RNA isolation from intact complex tissues
MR Miller, KJ Robinson, MD Cleary, CQ Doe
Nature methods 6 (6), 439-441, 2009
Genomic patterns of introgression in rainbow and westslope cutthroat trout illuminated by overlapping paired‐end RAD sequencing
PA Hohenlohe, MD Day, SJ Amish, MR Miller, N Kamps‐Hughes, ...
Molecular ecology 22 (11), 3002-3013, 2013
Thermal adaptation and acclimation of ectotherms from differing aquatic climates
SR Narum, NR Campbell, KA Meyer, MR Miller, RW Hardy
Molecular ecology 22 (11), 3090-3097, 2013
The development and characterization of a 57 K single nucleotide polymorphism array for rainbow trout
Y Palti, G Gao, S Liu, MP Kent, S Lien, MR Miller, CE Rexroad III, T Moen
Molecular ecology resources 15 (3), 662-672, 2015
The evolutionary basis of premature migration in Pacific salmon highlights the utility of genomics for informing conservation
DJ Prince, SM O’Rourke, TQ Thompson, OA Ali, HS Lyman, IK Saglam, ...
Science advances 3 (8), e1603198, 2017
Rapid parallel evolution of standing variation in a single, complex, genomic region is associated with life history in steelhead/rainbow trout
DE Pearse, MR Miller, A Abadía-Cardoso, JC Garza
Proceedings of the Royal Society B: Biological Sciences 281 (1783), 20140012, 2014
Developmentally regulated subnuclear genome reorganization restricts neural progenitor competence in Drosophila
M Kohwi, JR Lupton, SL Lai, MR Miller, CQ Doe
Cell 152 (1-2), 97-108, 2013
Genetic architecture of migration-related traits in rainbow and steelhead trout, Oncorhynchus mykiss
BC Hecht, FP Thrower, MC Hale, MR Miller, KM Nichols
G3: Genes, Genomes, Genetics 2 (9), 1113-1127, 2012
Mouse TU tagging: a chemical/genetic intersectional method for purifying cell type-specific nascent RNA
L Gay, MR Miller, PB Ventura, V Devasthali, Z Vue, HL Thompson, ...
Genes & development 27 (1), 98-115, 2013
Evaluating adaptive divergence between migratory and nonmigratory ecotypes of a salmonid fish, Oncorhynchus mykiss
MC Hale, FP Thrower, EA Berntson, MR Miller, KM Nichols
G3: Genes, Genomes, Genetics 3 (8), 1273-1285, 2013
RAD marker microarrays enable rapid mapping of zebrafish mutations
MR Miller, TS Atwood, BF Eames, JK Eberhart, YL Yan, JH Postlethwait, ...
Genome biology 8 (6), 1-10, 2007
Sex-dependent dominance maintains migration supergene in rainbow trout
DE Pearse, NJ Barson, T Nome, G Gao, MA Campbell, A Abadía-Cardoso, ...
Nature ecology & evolution 3 (12), 1731-1742, 2019
Anthropogenic habitat alteration leads to rapid loss of adaptive variation and restoration potential in wild salmon populations
TQ Thompson, MR Bellinger, SM O’Rourke, DJ Prince, AE Stevenson, ...
Proceedings of the National Academy of Sciences 116 (1), 177-186, 2019
Trade‐offs and utility of alternative RADseq methods: Reply to Puritz et al.
KR Andrews, PA Hohenlohe, MR Miller, BK Hand, JE Seeb, G Luikart
Molecular Ecology 23 (24), 5943-5946, 2014
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