Sparse signal recovery methods for variant detection in next-generation sequencing data. M Banuelos, R Almanza, L Adhikari, S Sindi, RF Marcia ICASSP, 864-868, 2016 | 16 | 2016 |
Sparse genomic structural variant detection: Exploiting parent-child relatedness for signal recovery M Banuelos, R Almanza, L Adhikari, RF Mareia, S Sindi 2016 IEEE Statistical Signal Processing Workshop (SSP), 1-5, 2016 | 14 | 2016 |
Constrained variant detection with sparc: Sparsity, parental relatedness, and coverage M Banuelos, R Almanza, L Adhikari, RF Marcia, S Sindi 2016 38th Annual International Conference of the IEEE Engineering in …, 2016 | 12 | 2016 |
Detecting novel structural variants in genomes by leveraging parent-child relatedness M Spence, M Banuelos, RF Marcia, S Sindi 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2018 | 9 | 2018 |
Nonconvex regularization for sparse genomic variant signal detection M Banuelos, L Adhikari, R Almanza, A Fujikawa, J Sahagún, K Sanderson, ... 2017 IEEE International Symposium on Medical Measurements and Applications …, 2017 | 9 | 2017 |
Deep neural networks for low-resolution photon-limited imaging O DeGuchy, F Santiago, M Banuelos, RF Marcia ICASSP 2019-2019 IEEE International Conference on Acoustics, Speech and …, 2019 | 8 | 2019 |
Negative binomial optimization for biomedical structural variant signal reconstruction M Banuelos, S Sindi, RF Marcia 2018 IEEE International Conference on Acoustics, Speech and Signal …, 2018 | 8 | 2018 |
Detecting higher order genomic variant interactions with spectral analysis D Uminsky, M Banuelos, L González-Albino, R Garza, SA Nwakanma 2019 27th European Signal Processing Conference (EUSIPCO), 1-5, 2019 | 7 | 2019 |
Sparse diploid spatial biosignal recovery for genomic variation detection M Banuelos, L Adhikari, R Almanza, A Fujikawa, J Sahagún, K Sanderson, ... 2017 IEEE International Symposium on Medical Measurements and Applications …, 2017 | 7 | 2017 |
Detecting inherited and novel structural variants in low-coverage parent-child sequencing data M Spence, M Banuelos, RF Marcia, S Sindi Methods 173, 61-68, 2020 | 5 | 2020 |
Biomedical signal recovery: Genomic variant detection in family lineages M Banuelos, R Almanza, L Adhikari, S Sindi, RF Marcia 2017 IEEE 5th Portuguese Meeting on Bioengineering (ENBENG), 1-4, 2017 | 5 | 2017 |
A neural network approach for anomaly detection in genomic signals E Sawyer, M Banuelos, RF Marcia, S Sindi 2020 Asia-Pacific Signal and Information Processing Association Annual …, 2020 | 3 | 2020 |
Predicting novel and inherited variants in parent-child trios M Spence, M Banuelos, RF Marcia, S Sindi 2019 IEEE International Symposium on Medical Measurements and Applications …, 2019 | 3 | 2019 |
Modeling transposable element dynamics with fragmentation equations M Banuelos, S Sindi Mathematical Biosciences 302, 46-66, 2018 | 3 | 2018 |
Genetic Variant Detection Over Generations: Sparsity-Constrained Optimization Using Block-Coordinate Descent M Aburidi, M Banuelos, S Sindi, R Marcia 2023 IEEE International Symposium on Medical Measurements and Applications …, 2023 | 2 | 2023 |
A recommendation systems approach for detecting epistasis in genomic signals M Banuelos, M Hernandez 2021 Asia-Pacific Signal and Information Processing Association Annual …, 2021 | 2 | 2021 |
Genomic signal processing for variant detection in diploid parent-child trios M Spence, M Banuelos, RF Marcia, S Sindi 2020 28th European Signal Processing Conference (EUSIPCO), 1318-1322, 2021 | 2 | 2021 |
User-item recommendation approaches to detect genomic variant interactions E Andrade, N Tom, M Banuelos 2022 Asia-Pacific Signal and Information Processing Association Annual …, 2022 | 1 | 2022 |
Novel structural variant genome detection in extended pedigrees through negative binomial optimization A Lazar, M Banuelos, S Sindi, RF Marcia 2021 55th Asilomar Conference on Signals, Systems, and Computers, 563-567, 2021 | 1 | 2021 |
Detecting novel genomic structural variants through negative binomial optimization A Lazar, M Banuelos, S Sindi, RF Marcia 2020 54th Asilomar Conference on Signals, Systems, and Computers, 511-515, 2020 | 1 | 2020 |