| Whole genome sequencing of Mycobacterium tuberculosis: current standards and open issues CJ Meehan, GA Goig, TA Kohl, L Verboven, A Dippenaar, M Ezewudo, ... NATURE reviews microbiology 17 (9), 533-545, 2019 | 322 | 2019 |
| A new phylogenetic framework for the animal-adapted Mycobacterium tuberculosis complex D Brites, C Loiseau, F Menardo, S Borrell, MB Boniotti, R Warren, ... Frontiers in microbiology 9, 417672, 2018 | 171 | 2018 |
| Mutations in ppe38 block PE_PGRS secretion and increase virulence of Mycobacterium tuberculosis LS Ates, A Dippenaar, R Ummels, SR Piersma, AD van der Woude, ... Nature microbiology 3 (2), 181-188, 2018 | 111 | 2018 |
| Whole genome sequencing reveals genomic heterogeneity and antibiotic purification in Mycobacterium tuberculosis isolates PA Black, M De Vos, GE Louw, RG Van der Merwe, A Dippenaar, ... BMC genomics 16, 1-14, 2015 | 83 | 2015 |
| Bedaquiline microheteroresistance after cessation of tuberculosis treatment M De Vos, SD Ley, KB Wiggins, B Derendinger, A Dippenaar, ... New England Journal of Medicine 380 (22), 2178-2180, 2019 | 59 | 2019 |
| Whole genome sequence analysis of Mycobacterium suricattae A Dippenaar, SDC Parsons, SL Sampson, RG Van Der Merwe, JA Drewe, ... Tuberculosis 95 (6), 682-688, 2015 | 56 | 2015 |
| Interferon-gamma release assays for the detection of Mycobacterium tuberculosis infection in children with cancer DC Stefan, A Dippenaar, AK Detjen, HS Schaaf, BJ Marais, B Kriel, ... The International Journal of Tuberculosis and Lung Disease 14 (6), 689-694, 2010 | 51 | 2010 |
| Review of Diagnostic Tests for Detection of Mycobacterium bovis Infection in South African Wildlife N Bernitz, TJ Kerr, WJ Goosen, J Chileshe, RL Higgitt, EO Roos, ... Frontiers in Veterinary Science 8, 588697, 2021 | 45 | 2021 |
| Ancient and recent differences in the intrinsic susceptibility of Mycobacterium tuberculosis complex to pretomanid A Bateson, J Ortiz Canseco, TD McHugh, AA Witney, S Feuerriegel, ... Journal of Antimicrobial Chemotherapy 77 (6), 1685-1693, 2022 | 42 | 2022 |
| Fatal tuberculosis in a free-ranging African elephant and one health implications of human pathogens in wildlife MA Miller, P Buss, EO Roos, G Hausler, A Dippenaar, E Mitchell, ... Frontiers in Veterinary Science 6, 18, 2019 | 41 | 2019 |
| Unexpected Genomic and Phenotypic Diversity of Mycobacterium africanum Lineage 5 Affects Drug Resistance, Protein Secretion, and Immunogenicity LS Ates, A Dippenaar, F Sayes, A Pawlik, C Bouchier, L Ma, RM Warren, ... Genome biology and evolution 10 (8), 1858-1874, 2018 | 38 | 2018 |
| Accuracy of whole genome sequencing versus phenotypic (MGIT) and commercial molecular tests for detection of drug-resistant Mycobacterium tuberculosis isolated from patients in … CS Feliciano, EI Namburete, JR Plaça, K Peronni, A Dippenaar, ... Tuberculosis 110, 59-67, 2018 | 35 | 2018 |
| Progenitor strain introduction of Mycobacterium bovis at the wildlife-livestock interface can lead to clonal expansion of the disease in a single ecosystem A Dippenaar, SDC Parsons, MA Miller, T Hlokwe, NCG van Pittius, ... Infection, Genetics and Evolution 51, 235-238, 2017 | 35 | 2017 |
| Comprehensive characterization of the attenuated double auxotroph Mycobacterium tuberculosisΔleuDΔpanCD as an alternative to H37Rv JM Mouton, T Heunis, A Dippenaar, JL Gallant, L Kleynhans, ... Frontiers in Microbiology 10, 472559, 2019 | 34 | 2019 |
| Evaluation of Nanopore sequencing for Mycobacterium tuberculosis drug susceptibility testing and outbreak investigation: a genomic analysis MB Hall, MS Rabodoarivelo, A Koch, A Dippenaar, S George, ... The Lancet Microbe 4 (2), e84-e92, 2023 | 27 | 2023 |
| Nanopore sequencing for mycobacterium tuberculosis: A critical review of the literature, new developments, and future opportunities A Dippenaar, SN Goossens, M Grobbelaar, S Oostvogels, B Cuypers, ... Journal of clinical microbiology 60 (1), e00646-21, 2022 | 27 | 2022 |
| A landscape of genomic alterations at the root of a near-untreatable tuberculosis epidemic M Klopper, TH Heupink, G Hill-Cawthorne, EM Streicher, A Dippenaar, ... BMC medicine 18, 1-14, 2020 | 24 | 2020 |
| Genetic Diversity in Mycobacterium tuberculosis Clinical Isolates and Resulting Outcomes of Tuberculosis Infection and Disease JS Peters, N Ismail, A Dippenaar, S Ma, DR Sherman, RM Warren, ... Annual Review of Genetics 54, 511-537, 2020 | 23 | 2020 |
| Proteogenomic Investigation of Strain Variation in Clinical Mycobacterium tuberculosis Isolates T Heunis, A Dippenaar, RM Warren, PD van Helden, RG van der Merwe, ... Journal of Proteome Research 16 (10), 3841-3851, 2017 | 21 | 2017 |
| Capacity building for whole genome sequencing of Mycobacterium tuberculosis and bioinformatics in high TB burden countries E Rivière, TH Heupink, N Ismail, A Dippenaar, C Clarke, G Abebe, ... Briefings in Bioinformatics 22 (4), bbaa246, 2021 | 19 | 2021 |
