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Kamil Slowikowski
Kamil Slowikowski
Massachusetts General Hospital
Verified email at broadinstitute.org - Homepage
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Cited by
Year
Fast, sensitive and accurate integration of single-cell data with Harmony
I Korsunsky, N Millard, J Fan, K Slowikowski, F Zhang, K Wei, ...
Nature methods 16 (12), 1289-1296, 2019
36672019
Pathologically expanded peripheral T helper cell subset drives B cells in rheumatoid arthritis
DA Rao, MF Gurish, JL Marshall, K Slowikowski, CY Fonseka, Y Liu, ...
Nature 542 (7639), 110-114, 2017
8762017
Heritability enrichment of specifically expressed genes identifies disease-relevant tissues and cell types
HK Finucane, YA Reshef, V Anttila, K Slowikowski, A Gusev, A Byrnes, ...
Nature genetics 50 (4), 621-629, 2018
8502018
Defining inflammatory cell states in rheumatoid arthritis joint synovial tissues by integrating single-cell transcriptomics and mass cytometry
F Zhang, K Wei, K Slowikowski, CY Fonseka, DA Rao, S Kelly, ...
Nature immunology 20 (7), 928-942, 2019
8442019
The immune cell landscape in kidneys of patients with lupus nephritis
A Arazi, DA Rao, CC Berthier, A Davidson, Y Liu, PJ Hoover, A Chicoine, ...
Nature immunology 20 (7), 902-914, 2019
5622019
The immune cell landscape in kidneys of patients with lupus nephritis
A Arazi, DA Rao, CC Berthier, A Davidson, Y Liu, PJ Hoover, A Chicoine, ...
Nature immunology 20 (7), 902-914, 2019
5552019
Common genetic variants modulate pathogen-sensing responses in human dendritic cells
MN Lee, C Ye, AC Villani, T Raj, W Li, TM Eisenhaure, SH Imboywa, ...
Science 343 (6175), 1246980, 2014
4752014
ggrepel: Automatically position non-overlapping text labels with ‘ggplot2’
K Slowikowski
R package version 0.9 1, 2021
4542021
Functionally distinct disease-associated fibroblast subsets in rheumatoid arthritis
F Mizoguchi, K Slowikowski, K Wei, JL Marshall, DA Rao, SK Chang, ...
Nature communications 9 (1), 789, 2018
4142018
Refining the role of de novo protein-truncating variants in neurodevelopmental disorders by using population reference samples
JA Kosmicki, KE Samocha, DP Howrigan, SJ Sanders, K Slowikowski, ...
Nature genetics 49 (4), 504-510, 2017
3252017
Genetic association study of QT interval highlights role for calcium signaling pathways in myocardial repolarization
DE Arking, SL Pulit, L Crotti, P Van Der Harst, PB Munroe, TT Koopmann, ...
Nature genetics 46 (8), 826-836, 2014
3202014
Tubular cell and keratinocyte single-cell transcriptomics applied to lupus nephritis reveal type I IFN and fibrosis relevant pathways
E Der, H Suryawanshi, P Morozov, M Kustagi, B Goilav, S Ranabothu, ...
Nature immunology 20 (7), 915-927, 2019
3092019
Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics
C Muus, MD Luecken, G Eraslan, L Sikkema, A Waghray, G Heimberg, ...
Nature medicine 27 (3), 546-559, 2021
2932021
Integrated analyses of single-cell atlases reveal age, gender, and smoking status associations with cell type-specific expression of mediators of SARS-CoV-2 viral entry and …
C Muus, MD Luecken, G Eraslan, A Waghray, G Heimberg, L Sikkema, ...
BioRxiv, 2020.04. 19.049254, 2020
2542020
Ggrepel: automatically position non-overlapping text labels with ‘ggplot2’. R package version 0.9. 1
K Slowikowski
https://CRAN. R-project. org/package= ggrepel, 2021
1822021
Disentangling the Effects of Colocalizing Genomic Annotations to Functionally Prioritize Non-coding Variants within Complex-Trait Loci
G Trynka, HJ Westra, K Slowikowski, X Hu, H Xu, BE Stranger, RJ Klein, ...
The American Journal of Human Genetics 152 (139), 97-139, 2015
1422015
Single-cell transcriptomics in cancer: computational challenges and opportunities
J Fan, K Slowikowski, F Zhang
Experimental & Molecular Medicine 52 (9), 1452-1465, 2020
1412020
Mixed-effects association of single cells identifies an expanded effector CD4+ T cell subset in rheumatoid arthritis
CY Fonseka, DA Rao, NC Teslovich, I Korsunsky, SK Hannes, ...
Science translational medicine 10 (463), eaaq0305, 2018
1412018
Lymphocyte innateness defined by transcriptional states reflects a balance between proliferation and effector functions
M Gutierrez-Arcelus, N Teslovich, AR Mola, RB Polidoro, A Nathan, H Kim, ...
Nature communications 10 (1), 687, 2019
1332019
52 genetic loci influencing myocardial mass
P Van der Harst, J van Setten, N Verweij, G Vogler, L Franke, ...
Journal of the American College of Cardiology 68 (13), 1435-1448, 2016
1232016
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