| Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles A Subramanian, P Tamayo, VK Mootha, S Mukherjee, BL Ebert, ... Proceedings of the National Academy of Sciences 102 (43), 15545-15550, 2005 | 47678 | 2005 |
| Molecular classification of cancer: class discovery and class prediction by gene expression monitoring TR Golub, DK Slonim, P Tamayo, C Huard, M Gaasenbeek, JP Mesirov, ... science 286 (5439), 531-537, 1999 | 15702 | 1999 |
| PGC-1α-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes VK Mootha, CM Lindgren, KF Eriksson, A Subramanian, S Sihag, J Lehar, ... Nature genetics 34 (3), 267-273, 2003 | 10441 | 2003 |
| The molecular signatures database hallmark gene set collection A Liberzon, C Birger, H Thorvaldsdóttir, M Ghandi, JP Mesirov, P Tamayo Cell systems 1 (6), 417-425, 2015 | 9463 | 2015 |
| Integrated genomic analysis identifies clinically relevant subtypes of glioblastoma characterized by abnormalities in PDGFRA, IDH1, EGFR, and NF1 RGW Verhaak, KA Hoadley, E Purdom, V Wang, Y Qi, MD Wilkerson, ... Cancer cell 17 (1), 98-110, 2010 | 8078 | 2010 |
| Molecular signatures database (MSigDB) 3.0 A Liberzon, A Subramanian, R Pinchback, H Thorvaldsdóttir, P Tamayo, ... Bioinformatics 27 (12), 1739-1740, 2011 | 5798 | 2011 |
| Interpreting patterns of gene expression with self-organizing maps: methods and application to hematopoietic differentiation P Tamayo, D Slonim, J Mesirov, Q Zhu, S Kitareewan, E Dmitrovsky, ... Proceedings of the National Academy of Sciences 96 (6), 2907-2912, 1999 | 3996 | 1999 |
| Systematic RNA interference reveals that oncogenic KRAS-driven cancers require TBK1 DA Barbie, P Tamayo, JS Boehm, SY Kim, SE Moody, IF Dunn, ... Nature 462 (7269), 108-112, 2009 | 3283 | 2009 |
| Diffuse large B-cell lymphoma outcome prediction by gene-expression profiling and supervised machine learning MA Shipp, KN Ross, P Tamayo, AP Weng, JL Kutok, RCT Aguiar, ... Nature medicine 8 (1), 68-74, 2002 | 3189 | 2002 |
| Gene expression correlates of clinical prostate cancer behavior D Singh, PG Febbo, K Ross, DG Jackson, J Manola, C Ladd, P Tamayo, ... Cancer cell 1 (2), 203-209, 2002 | 3160 | 2002 |
| Prediction of central nervous system embryonal tumour outcome based on gene expression SL Pomeroy, P Tamayo, M Gaasenbeek, LM Sturla, M Angelo, ... Nature 415 (6870), 436-442, 2002 | 2856 | 2002 |
| Multiclass cancer diagnosis using tumor gene expression signatures S Ramaswamy, P Tamayo, R Rifkin, S Mukherjee, CH Yeang, M Angelo, ... Proceedings of the National Academy of Sciences 98 (26), 15149-15154, 2001 | 2607 | 2001 |
| Consensus clustering: a resampling-based method for class discovery and visualization of gene expression microarray data S Monti, P Tamayo, J Mesirov, T Golub Machine learning 52, 91-118, 2003 | 2351 | 2003 |
| Metagenes and molecular pattern discovery using matrix factorization JP Brunet, P Tamayo, TR Golub, JP Mesirov Proceedings of the national academy of sciences 101 (12), 4164-4169, 2004 | 2326 | 2004 |
| GenePattern 2.0 M Reich, T Liefeld, J Gould, J Lerner, P Tamayo, JP Mesirov Nature genetics 38 (5), 500-501, 2006 | 2313 | 2006 |
| Dependency of a therapy-resistant state of cancer cells on a lipid peroxidase pathway VS Viswanathan, MJ Ryan, HD Dhruv, S Gill, OM Eichhoff, ... Nature 547 (7664), 453-457, 2017 | 1513 | 2017 |
| GSEA-P: a desktop application for Gene Set Enrichment Analysis A Subramanian, H Kuehn, J Gould, P Tamayo, JP Mesirov Bioinformatics 23 (23), 3251-3253, 2007 | 1427 | 2007 |
| Gene expression-based classification of malignant gliomas correlates better with survival than histological classification CL Nutt, DR Mani, RA Betensky, P Tamayo, JG Cairncross, C Ladd, ... Cancer research 63 (7), 1602-1607, 2003 | 1174 | 2003 |
| Identification of RPS14 as a 5q- syndrome gene by RNA interference screen BL Ebert, J Pretz, J Bosco, CY Chang, P Tamayo, N Galili, A Raza, ... Nature 451 (7176), 335-339, 2008 | 1095 | 2008 |
| SOX2 is an amplified lineage-survival oncogene in lung and esophageal squamous cell carcinomas AJ Bass, H Watanabe, CH Mermel, S Yu, S Perner, RG Verhaak, SY Kim, ... Nature genetics 41 (11), 1238-1242, 2009 | 1084 | 2009 |
