Cellular network entropy as the energy potential in Waddington's differentiation landscape CRS Banerji, D Miranda-Saavedra, S Severini, M Widschwendter, ... Scientific Reports 3, 3039, 2013 | 157 | 2013 |
PAX7 target genes are globally repressed in facioscapulohumeral muscular dystrophy skeletal muscle CRS Banerji, M Panamarova, H Hebaishi, RB White, F Relaix, S Severini, ... Nature Communications 8 (2152), 2017 | 93 | 2017 |
DUX4 induces a transcriptome more characteristic of a less-differentiated cell state and inhibits myogenesis P Knopp, YD Krom, CRS Banerji, M Panamarova, LA Moyle, B den Hamer, ... Journal of cell science 129 (20), 3816-3831, 2016 | 81 | 2016 |
Increased signaling entropy in cancer requires the scale-free property of proteininteraction networks AE Teschendorff, CRS Banerji, S Severini, R Kuehn, P Sollich Scientific reports 5 (1), 9646, 2015 | 65 | 2015 |
Dynamic transcriptomic analysis reveals suppression of PGC1α/ERRα drives perturbed myogenesis in facioscapulohumeral muscular dystrophy CRS Banerji, M Panamarova, J Pruller, N Figeac, H Hebaishi, E Fidanis, ... Human molecular genetics 28 (8), 1244-1259, 2019 | 60 | 2019 |
β-catenin is central to DUX4-driven network rewiring in facioscapulohumeral muscular dystrophy CRS Banerji, P Knopp, LA Moyle, S Severini, RW Orrell, AE Teschendorff, ... Journal of the Royal Society Interface 12 (102), 20140797, 2015 | 58 | 2015 |
Pathomechanisms and biomarkers in facioscapulohumeral muscular dystrophy: roles of DUX4 and PAX7 CRS Banerji, PS Zammit EMBO molecular medicine 13 (8), e13695, 2021 | 46 | 2021 |
Intra-Tumour Signalling Entropy Determines Clinical Outcome in Breast and Lung Cancer CRS Banerji, S Severini, C Caldas, AE Teschendorff PLoS Comput Biol 11 (3), e1004115, 2015 | 45 | 2015 |
PAX7 target gene repression is a superior FSHD biomarker than DUX4 target gene activation, associating with pathological severity and identifying FSHD at the single-cell level CRS Banerji, PS Zammit Human Molecular Genetics 28 (13), 2224-2236, 2019 | 44 | 2019 |
Interplay between mitochondrial reactive oxygen species, oxidative stress and hypoxic adaptation in facioscapulohumeral muscular dystrophy: Metabolic stress as potential … P Heher, M Ganassi, A Weidinger, EN Engquist, J Pruller, TH Nguyen, ... Redox biology 51, 102251, 2022 | 36 | 2022 |
Skeletal muscle regeneration in facioscapulohumeral muscular dystrophy is correlated with pathological severity CRS Banerji, D Henderson, RN Tawil, PS Zammit Human Molecular Genetics 29 (16), 2746-2760, 2020 | 34 | 2020 |
Expression profiling of nuclear receptors in breast cancer identifies TLX as a mediator of growth and invasion in triple-negative breast cancer ML Lin, H Patel, J Remenyi, CRS Banerji, CF Lai, M Periyasamy, ... Oncotarget, 2015 | 31 | 2015 |
DUX4 expressing immortalized FSHD lymphoblastoid cells express genes elevated in FSHD muscle biopsies, correlating with the early stages of inflammation CRS Banerji, M Panamarova, PS Zammit Human Molecular Genetics 29 (14), 2285-2299, 2020 | 25* | 2020 |
Ret function in muscle stem cells points to tyrosine kinase inhibitor therapy for facioscapulohumeral muscular dystrophy LA Moyle, E Blanc, O Jaka, J Prueller, CRS Banerji, FS Tedesco, ... Elife 5, e11405, 2016 | 25 | 2016 |
Clinical AI tools must convey predictive uncertainty for each individual patient CRS Banerji, T Chakraborti, C Harbron, BD MacArthur Nature Medicine, 2023 | 21 | 2023 |
PAX7 target gene repression associates with FSHD progression and pathology over 1 year CRS Banerji Human Molecular Genetics 29 (13), 2124-2133, 2020 | 20 | 2020 |
Network Transfer Entropy and Metric Space for Causality Inference CRS Banerji, S Severini, AE Teschendorff Phys. Rev. E 87, 052814, 2013 | 17 | 2013 |
Facioscapulohumeral muscular dystrophy 1 patients participating in the UK FSHD registry can be subdivided into 4 patterns of self-reported symptoms CRS Banerji, P Cammish, T Evangelista, PS Zammit, V Straub, ... Neuromuscular Disorders 30 (4), 315-328, 2020 | 16 | 2020 |
A notion of graph likelihood and an infinite monkey theorem CRS Banerji, T Mansour, S Severini Journal of Physics A: Mathematical and Theoretical 47 (3), 035101, 2013 | 13 | 2013 |
DEPDC1B is a key regulator of myoblast proliferation in mouse and man N Figeac, J Pruller, I Hofer, M Fortier, HP Ortuste Quiroga, CRS Banerji, ... Cell proliferation 53 (1), e12717, 2020 | 12 | 2020 |