| Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases J Lloyd-Price, C Arze, AN Ananthakrishnan, M Schirmer, J Avila-Pacheco, ... Nature 569 (7758), 655-662, 2019 | 1895 | 2019 |
| Innate immune pattern recognition: a cell biological perspective SW Brubaker, KS Bonham, I Zanoni, JC Kagan Annual review of immunology 33, 257-290, 2015 | 1559 | 2015 |
| The Prevotella copri complex comprises four distinct clades underrepresented in westernized populations A Tett, KD Huang, F Asnicar, H Fehlner-Peach, E Pasolli, N Karcher, ... Cell host & microbe 26 (5), 666-679. e7, 2019 | 319 | 2019 |
| A promiscuous lipid-binding protein diversifies the subcellular sites of toll-like receptor signal transduction KS Bonham, MH Orzalli, K Hayashi, AI Wolf, C Glanemann, W Weninger, ... Cell 156 (4), 705-716, 2014 | 276 | 2014 |
| Extensive horizontal gene transfer in cheese-associated bacteria KS Bonham, BE Wolfe, RJ Dutton Elife 6, e22144, 2017 | 103 | 2017 |
| Comparative analysis of 16S rRNA gene and metagenome sequencing in pediatric gut microbiomes D Peterson, KS Bonham, S Rowland, CW Pattanayak, ... Frontiers in microbiology 12, 670336, 2021 | 90 | 2021 |
| Women are underrepresented in computational biology: An analysis of the scholarly literature in biology, computer science and computational biology KS Bonham, MI Stefan PLoS computational biology 13 (10), e1005134, 2017 | 90 | 2017 |
| Effects of a novel arginine methyltransferase inhibitor on T‐helper cell cytokine production K Bonham, S Hemmers, YH Lim, DM Hill, MG Finn, KA Mowen The FEBS journal 277 (9), 2096-2108, 2010 | 76 | 2010 |
| Chronic inflammation, neutrophil activity, and autoreactivity splits long COVID MC Woodruff, KS Bonham, FA Anam, TA Walker, CE Faliti, Y Ishii, ... Nature Communications 14 (1), 4201, 2023 | 34 | 2023 |
| NIP45 controls the magnitude of the type 2 T helper cell response JW Fathman, MF Gurish, S Hemmers, K Bonham, DS Friend, MJ Grusby, ... Proceedings of the National Academy of Sciences 107 (8), 3663-3668, 2010 | 24 | 2010 |
| Deep-sea microbes as tools to refine the rules of innate immune pattern recognition AE Gauthier, CE Chandler, V Poli, FM Gardner, A Tekiau, R Smith, ... Science immunology 6 (57), eabe0531, 2021 | 23 | 2021 |
| Family SES is associated with the gut microbiome in infants and children CR Lewis, KS Bonham, SH McCann, AR Volpe, V D’sa, M Naymik, ... Microorganisms 9 (8), 1608, 2021 | 19 | 2021 |
| Endosomes as platforms for NOD-like receptor signaling KS Bonham, JC Kagan Cell host & microbe 15 (5), 523-525, 2014 | 18 | 2014 |
| Targeted High-Resolution Taxonomic Identification of Bifidobacterium longum subsp. infantis Using Human Milk Oligosaccharide Metabolizing Genes L Tso, KS Bonham, A Fishbein, S Rowland, V Klepac-Ceraj Nutrients 13 (8), 2833, 2021 | 11 | 2021 |
| Alterations in the gut microbiome implicate key taxa and metabolic pathways across inflammatory arthritis phenotypes KN Thompson, KS Bonham, NE Ilott, GJ Britton, P Colmenero, SJ Bullers, ... Science translational medicine 15 (706), eabn4722, 2023 | 7 | 2023 |
| Gut microbes and their genes are associated with brain development and cognitive function in healthy children KS Bonham, MM Bruchhage, S Rowland, AR Volpe, K Dyer, V D’Sa, ... bioRxiv, 2020.02. 13.944181, 2020 | 5* | 2020 |
| Gender disparity in computational biology research publications KS Bonham, MI Stefan BioRxiv, 070631, 2016 | 4 | 2016 |
| Microclimate is a strong predictor of the native and invasive plant‐associated soil microbiome on San Cristóbal Island, Galápagos archipelago AA Schoenborn, SM Yannarell, CT MacVicar, NN Barriga‐Medina, ... Environmental Microbiology 25 (8), 1377-1392, 2023 | 3 | 2023 |
| Microbiome. jl and BiobakeryUtils. jl-Julia packages for working with microbial community data KS Bonham, AA Kayisire, AS Luo, V Klepac-Ceraj Journal of Open Source Software 6 (67), 3876, 2021 | 3 | 2021 |
| Inflammation and autoreactivity define a discrete subset of patients with post-acute sequelae of COVID-19, or long-COVID MC Woodruff, KS Bonham, FA Anam, TA Walker, Y Ishii, CY Kaminski, ... medRxiv, 2021.09. 21.21263845, 2021 | 3 | 2021 |
Jonathan C KaganHarvard Medical School/Boston Children's HospitalVerified email at childrens.harvard.edu
