| An integrated encyclopedia of DNA elements in the human genome ENCODE Project Consortium Nature 489 (7414), 57, 2012 | 17418 | 2012 |
| The genotype-tissue expression (GTEx) project J Lonsdale, J Thomas, M Salvatore, R Phillips, E Lo, S Shad, R Hasz, ... Nature genetics 45 (6), 580-585, 2013 | 8393 | 2013 |
| Integrative analysis of 111 reference human epigenomes A Kundaje, W Meuleman, J Ernst, M Bilenky, A Yen, A Heravi-Moussavi, ... Nature 518 (7539), 317-330, 2015 | 6402 | 2015 |
| GENCODE: the reference human genome annotation for The ENCODE Project J Harrow, A Frankish, JM Gonzalez, E Tapanari, M Diekhans, ... Genome research 22 (9), 1760-1774, 2012 | 5420 | 2012 |
| Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals M Guttman, I Amit, M Garber, C French, MF Lin, D Feldser, M Huarte, ... Nature 458 (7235), 223-227, 2009 | 4916 | 2009 |
| The Genotype-Tissue Expression (GTEx) pilot analysis: multitissue gene regulation in humans GTEx Consortium, KG Ardlie, DS Deluca, AV Segrè, TJ Sullivan, ... Science 348 (6235), 648-660, 2015 | 4848 | 2015 |
| Genetic effects on gene expression across human tissues GTEx Consortium Lead analysts: Aguet François 1 Brown Andrew A. 2 3 4 Castel ... Nature 550 (7675), 204-213, 2017 | 3639 | 2017 |
| Mapping and analysis of chromatin state dynamics in nine human cell types J Ernst, P Kheradpour, TS Mikkelsen, N Shoresh, LD Ward, CB Epstein, ... Nature 473 (7345), 43-49, 2011 | 3395 | 2011 |
| The GTEx Consortium atlas of genetic regulatory effects across human tissues GTEx Consortium Science 369 (6509), 1318-1330, 2020 | 3284 | 2020 |
| Genome sequence, comparative analysis and haplotype structure of the domestic dog K Lindblad-Toh, CM Wade, TS Mikkelsen, EK Karlsson, DB Jaffe, ... Nature 438 (7069), 803-819, 2005 | 3217 | 2005 |
| Histone modifications at human enhancers reflect global cell-type-specific gene expression ND Heintzman, GC Hon, RD Hawkins, P Kheradpour, A Stark, LF Harp, ... Nature 459 (7243), 108-112, 2009 | 2991 | 2009 |
| GENCODE reference annotation for the human and mouse genomes A Frankish, M Diekhans, AM Ferreira, R Johnson, I Jungreis, J Loveland, ... Nucleic acids research 47 (D1), D766-D773, 2019 | 2961 | 2019 |
| Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila J Brennecke, AA Aravin, A Stark, M Dus, M Kellis, R Sachidanandam, ... Cell 128 (6), 1089-1103, 2007 | 2819 | 2007 |
| Transcriptional regulatory code of a eukaryotic genome CT Harbison, DB Gordon, TI Lee, NJ Rinaldi, KD Macisaac, TW Danford, ... Nature 431 (7004), 99-104, 2004 | 2695 | 2004 |
| ChromHMM: automating chromatin-state discovery and characterization J Ernst, M Kellis Nature methods 9 (3), 215-216, 2012 | 2611 | 2012 |
| HaploReg: a resource for exploring chromatin states, conservation, and regulatory motif alterations within sets of genetically linked variants LD Ward, M Kellis Nucleic acids research 40 (D1), D930-D934, 2012 | 2477 | 2012 |
| Systematic discovery of regulatory motifs in human promoters and 3′ UTRs by comparison of several mammals X Xie, J Lu, EJ Kulbokas, TR Golub, V Mootha, K Lindblad-Toh, ... Nature 434 (7031), 338-345, 2005 | 2418 | 2005 |
| ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia SG Landt, GK Marinov, A Kundaje, P Kheradpour, F Pauli, S Batzoglou, ... Genome research 22 (9), 1813-1831, 2012 | 2347 | 2012 |
| Evolution of genes and genomes on the Drosophila phylogeny AG Clark, MB Eisen, DR Smith, CM Bergman, B Oliver, TA Markow, ... Nature 450 (7167), 203-18, 2007 | 2288 | 2007 |
| Sequencing and comparison of yeast species to identify genes and regulatory elements M Kellis, N Patterson, M Endrizzi, B Birren, ES Lander Nature 423 (6937), 241-254, 2003 | 2227 | 2003 |
Jason ErnstProfessor, University of California, Los AngelesVerified email at ucla.edu
