MultiNotch MS3 enables accurate, sensitive, and multiplexed detection of differential expression across cancer cell line proteomes GC McAlister, DP Nusinow, MP Jedrychowski, M Wühr, EL Huttlin, ... Analytical chemistry 86 (14), 7150-7158, 2014 | 1260 | 2014 |
Quantitative Proteomics of the Cancer Cell Line Encyclopedia DP Nusinow, J Szpyt, M Ghandi, CM Rose, ER McDonald III, M Kalocsay, ... Cell 180 (2), 387-402. e16, 2020 | 756 | 2020 |
Dual proteome-scale networks reveal cell-specific remodeling of the human interactome EL Huttlin, RJ Bruckner, J Navarrete-Perea, JR Cannon, K Baltier, ... Cell 184 (11), 3022-3040. e28, 2021 | 670 | 2021 |
Quantitative Temporal Viromics: An Approach to Investigate Host-Pathogen Interaction MP Weekes, P Tomasec, EL Huttlin, CA Fielding, D Nusinow, RJ Stanton, ... Cell 157 (6), 1460-1472, 2014 | 490 | 2014 |
A mass-tolerant database search identifies a large proportion of unassigned spectra in shotgun proteomics as modified peptides JM Chick, D Kolippakkam, DP Nusinow, B Zhai, R Rad, EL Huttlin, ... Nature biotechnology 33 (7), 743-749, 2015 | 449 | 2015 |
A mass-tolerant database search identifies a large proportion of unassigned spectra in shotgun proteomics as modified peptides JM Chick, D Kolippakkam, DP Nusinow, B Zhai, R Rad, EL Huttlin, ... Nature biotechnology 33 (7), 743-749, 2015 | 449 | 2015 |
A mass-tolerant database search identifies a large proportion of unassigned spectra in shotgun proteomics as modified peptides JM Chick, D Kolippakkam, DP Nusinow, B Zhai, R Rad, EL Huttlin, ... Nature biotechnology 33 (7), 743-749, 2015 | 449 | 2015 |
A mass-tolerant database search identifies a large proportion of unassigned spectra in shotgun proteomics as modified peptides JM Chick, D Kolippakkam, DP Nusinow, B Zhai, R Rad, EL Huttlin, ... Nature biotechnology 33 (7), 743-749, 2015 | 449 | 2015 |
A mass-tolerant database search identifies a large proportion of unassigned spectra in shotgun proteomics as modified peptides JM Chick, D Kolippakkam, DP Nusinow, B Zhai, R Rad, EL Huttlin, ... Nature biotechnology 33 (7), 743-749, 2015 | 449 | 2015 |
A mass-tolerant database search identifies a large proportion of unassigned spectra in shotgun proteomics as modified peptides JM Chick, D Kolippakkam, DP Nusinow, B Zhai, R Rad, EL Huttlin, ... Nature biotechnology 33 (7), 743-749, 2015 | 449 | 2015 |
A mass-tolerant database search identifies a large proportion of unassigned spectra in shotgun proteomics as modified peptides JM Chick, D Kolippakkam, DP Nusinow, B Zhai, R Rad, EL Huttlin, ... Nature biotechnology 33 (7), 743-749, 2015 | 449 | 2015 |
Reimagining high-throughput profiling of reactive cysteines for cell-based screening of large electrophile libraries M Kuljanin, DC Mitchell, DK Schweppe, AS Gikandi, DP Nusinow, ... Nature Biotechnology 39 (5), 630-641, 2021 | 202 | 2021 |
Estimating the selective effects of heterozygous protein-truncating variants from human exome data CA Cassa, D Weghorn, DJ Balick, DM Jordan, D Nusinow, KE Samocha, ... Nature Genetics, 2017 | 159 | 2017 |
Active instrument engagement combined with a real-time database search for improved performance of sample multiplexing workflows BK Erickson, J Mintseris, DK Schweppe, J Navarrete-Perea, AR Erickson, ... Journal of proteome research, 2019 | 121 | 2019 |
Investigation of Proteomic and Phosphoproteomic Responses to Signaling Network Perturbations Reveals Functional Pathway Organizations in Yeast J Li, JA Paulo, DP Nusinow, EL Huttlin, SP Gygi Cell reports 29 (7), 2092-2104. e4, 2019 | 53 | 2019 |
Networked-based characterization of extracellular matrix proteins from adult mouse pulmonary and aortic valves PM Angel, D Nusinow, CB Brown, K Violette, JV Barnett, B Zhang, ... Journal of proteome research 10 (2), 812-823, 2010 | 52 | 2010 |
Reciprocal roles for bowl and lines in specifying the peripodial epithelium and the disc proper of the Drosophila wing primordium D Nusinow, L Greenberg, V Hatini Development 135 (18), 3031-3041, 2008 | 24 | 2008 |
Essential roles for stat92E in expanding and patterning the proximodistal axis of the Drosophila wing imaginal disc V Hatini, E Kula-Eversole, D Nusinow, SJ Del Signore Developmental biology 378 (1), 38-50, 2013 | 19 | 2013 |
An ultra-tolerant database search reveals that a myriad of modified peptides contributes to unassigned spectra in shotgun proteomics JM Chick, D Kolippakkam, DP Nusinow, B Zhai, R Rad, EL Huttlin, ... Nature biotechnology 33 (7), 743, 2015 | 17 | 2015 |
Network-based inference from complex proteomic mixtures using SNIPE DP Nusinow, A Kiezun, DJ O’Connell, JM Chick, Y Yue, RL Maas, ... Bioinformatics 28 (23), 3115-3122, 2012 | 13 | 2012 |