| Integrated genomic characterization of oesophageal carcinoma Cancer Genome Atlas Research Network Nature 541 (7636), 169, 2017 | 564 | 2017 |
| The chromatin accessibility landscape of primary human cancers MR Corces, JM Granja, S Shams, BH Louie, JA Seoane, W Zhou, ... Science 362 (6413), 2018 | 284 | 2018 |
| Classification of EEG signals using relative wavelet energy and artificial neural networks L Guo, D Rivero, JA Seoane, A Pazos Proceedings of the first ACM/SIGEVO Summit on Genetic and Evolutionary …, 2009 | 208 | 2009 |
| Comparative molecular analysis of gastrointestinal adenocarcinomas Y Liu, NS Sethi, T Hinoue, BG Schneider, AD Cherniack, F Sanchez-Vega, ... Cancer cell 33 (4), 721-735. e8, 2018 | 170 | 2018 |
| Quantitative evidence for early metastatic seeding in colorectal cancer Z Hu, J Ding, Z Ma, R Sun, JA Seoane, JS Shaffer, CJ Suarez, ... Nature genetics 51 (7), 1113-1122, 2019 | 121 | 2019 |
| Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen MP Menden, D Wang, MJ Mason, B Szalai, KC Bulusu, Y Guan, T Yu, ... Nature communications 10 (1), 1-17, 2019 | 87 | 2019 |
| Dynamics of breast-cancer relapse reveal late-recurring ER-positive genomic subgroups OM Rueda, SJ Sammut, JA Seoane, SF Chin, JL Caswell-Jin, M Callari, ... Nature 567 (7748), 399-404, 2019 | 80 | 2019 |
| A p53 super-tumor suppressor reveals a tumor suppressive p53-Ptpn14-Yap axis in pancreatic cancer SS Mello, LJ Valente, N Raj, JA Seoane, BM Flowers, J McClendon, ... Cancer cell 32 (4), 460-473. e6, 2017 | 79 | 2017 |
| Drug discovery and design for complex diseases through QSAR computational methods C R Munteanu, E Fernández-Blanco, J A Seoane, P Izquierdo-Novo, ... Current pharmaceutical design 16 (24), 2640-2655, 2010 | 69 | 2010 |
| A pathway-based data integration framework for prediction of disease progression JA Seoane, INM Day, TR Gaunt, C Campbell Bioinformatics 30 (6), 838-845, 2014 | 53 | 2014 |
| Mapping the in vivo fitness landscape of lung adenocarcinoma tumor suppression in mice ZN Rogers, CD McFarland, IP Winters, JA Seoane, JJ Brady, S Yoon, ... Nature genetics 50 (4), 483-486, 2018 | 46 | 2018 |
| CRISPR screens in cancer spheroids identify 3D growth-specific vulnerabilities K Han, SE Pierce, A Li, K Spees, GR Anderson, JA Seoane, YH Lo, ... Nature 580 (7801), 136-141, 2020 | 45 | 2020 |
| Star graphs of protein sequences and proteome mass spectra in cancer prediction JM Vázquez, V Aguiar, JA Seoane, A Freire, JA Serantes, J Dorado, ... Current Proteomics 6 (4), 275-288, 2009 | 43 | 2009 |
| RRegrs: an R package for computer-aided model selection with multiple regression models G Tsiliki, CR Munteanu, JA Seoane, C Fernandez-Lozano, H Sarimveis, ... Journal of cheminformatics 7 (1), 1-16, 2015 | 42 | 2015 |
| Texture classification using feature selection and kernel-based techniques C Fernandez-Lozano, JA Seoane, M Gestal, TR Gaunt, J Dorado, ... Soft Computing 19 (9), 2469-2480, 2015 | 41 | 2015 |
| Canonical correlation analysis for gene-based pleiotropy discovery JA Seoane, C Campbell, INM Day, JP Casas, TR Gaunt PLoS Comput Biol 10 (10), e1003876, 2014 | 37 | 2014 |
| An artificial neural network improves the non-invasive diagnosis of significant fibrosis in HIV/HCV coinfected patients S Resino, JA Seoane, JM Bellón, J Dorado, F Martin-Sanchez, E Alvarez, ... Journal of Infection 62 (1), 77-86, 2011 | 37 | 2011 |
| Breast density classification to reduce false positives in CADe systems N Vállez, G Bueno, O Déniz, J Dorado, JA Seoane, A Pazos, C Pastor Computer methods and programs in biomedicine 113 (2), 569-584, 2014 | 34 | 2014 |
| Naďve Bayes QSDR classification based on spiral-graph Shannon entropies for protein biomarkers in human colon cancer V Aguiar-Pulido, CR Munteanu, JA Seoane, E Fernandez-Blanco, ... Molecular BioSystems 8 (6), 1716-1722, 2012 | 30 | 2012 |
| Classification of signaling proteins based on molecular star graph descriptors using Machine Learning models C Fernandez-Lozano, RF Cuinas, JA Seoane, E Fernandez-Blanco, ... Journal of theoretical biology 384, 50-58, 2015 | 25 | 2015 |
