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Jochen Kursawe
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Chaste: cancer, heart and soft tissue environment
FR Cooper, RE Baker, MO Bernabeu, R Bordas, L Bowler, ...
Journal of Open Source Software 5 (47), 2020
622020
Quantitative single-cell live imaging links HES5 dynamics with cell-state and fate in murine neurogenesis
CS Manning, V Biga, J Boyd, J Kursawe, B Ymisson, DG Spiller, ...
Nature communications 10 (1), 2835, 2019
542019
Transient aging in fractional Brownian and Langevin-equation motion
J Kursawe, J Schulz, R Metzler
Physical Review E 88 (6), 062124, 2013
522013
Capabilities and limitations of tissue size control through passive mechanical forces
J Kursawe, PA Brodskiy, JJ Zartman, RE Baker, AG Fletcher
PLoS computational biology 11 (12), e1004679, 2015
432015
Approximate Bayesian computation reveals the importance of repeated measurements for parameterising cell-based models of growing tissues
J Kursawe, RE Baker, AG Fletcher
Journal of theoretical biology 443, 66-81, 2018
382018
Impact of implementation choices on quantitative predictions of cell-based computational models
J Kursawe, RE Baker, AG Fletcher
Journal of Computational Physics 345, 752-767, 2017
342017
Half-explicit timestepping schemes on velocity level based on time-discontinuous Galerkin methods
T Schindler, S Rezaei, J Kursawe, V Acary
Computer Methods in Applied Mechanics and Engineering 290, 250-276, 2015
322015
Dynamic properties of noise and Her6 levels are optimized by miR‐9, allowing the decoding of the Her6 oscillator
X Soto, V Biga, J Kursawe, R Lea, P Doostdar, R Thomas, N Papalopulu
The EMBO Journal 39 (12), e103558, 2020
252020
A dynamic, spatially periodic, micro‐pattern of HES5 underlies neurogenesis in the mouse spinal cord
V Biga, J Hawley, X Soto, E Johns, D Han, H Bennett, AD Adamson, ...
Molecular Systems Biology 17 (5), e9902, 2021
152021
Robust cell tracking in epithelial tissues through identification of maximum common subgraphs
J Kursawe, R Bardenet, JJ Zartman, RE Baker, AG Fletcher
Journal of the Royal Society Interface 13 (124), 20160725, 2016
102016
Differential phase register of Hes1 oscillations with mitoses underlies cell-cycle heterogeneity in ER+ breast cancer cells
N Sabherwal, A Rowntree, E Marinopoulou, T Pettini, S Hourihane, ...
Proceedings of the National Academy of Sciences 118 (45), e2113527118, 2021
92021
Inferring kinetic parameters of oscillatory gene regulation from single cell time-series data
J Burton, CS Manning, M Rattray, N Papalopulu, J Kursawe
Journal of the Royal Society Interface 18 (182), 20210393, 2021
62021
Coupled differentiation and division of embryonic stem cells inferred from clonal snapshots
LJ Ruske, J Kursawe, A Tsakiridis, V Wilson, AG Fletcher, RA Blythe, ...
Physical Biology 17 (6), 065009, 2020
52020
Sequential and additive expression of miR-9 precursors control timing of neurogenesis
X Soto, J Burton, CS Manning, T Minchington, R Lea, J Lee, J Kursawe, ...
Development 149 (19), dev200474, 2022
32022
Quantitative, real-time, single cell analysis in tissue reveals expression dynamics of neurogenesis
CS Manning, V Biga, J Boyd, J Kursawe, B Ymisson, DG Spiller, ...
bioRxiv 10, 373407, 2018
32018
QuickStitch for seamless stitching of confocal mosaics through high-pass filtering and recursive normalization
PA Brodskiy, PM Eberts, C Narciso, J Kursawe, A Fletcher, JJ Zartman
bioRxiv, 075440, 2016
32016
miR-9 mediated noise optimization of the her6 oscillator is needed for cell state progression in the Zebrafish hindbrain
X Soto, V Biga, J Kursawe, R Lea, P Doostdar, N Papalopulu
bioRxiv, 608604, 2019
12019
Simulating BRAFV600E-MEK-ERK signalling dynamics in response to vertical inhibition treatment strategies
A De Carli, Y Kapelyukh, J Kursawe, MAJ Chaplain, CR Wolf, S Hamis
npj Systems Biology and Applications 10 (1), 51, 2024
2024
Estimating full-field displacement in biological images using deep learning
SJET Warsop, S Caixeiro, M Bischoff, J Kursawe, GD Bruce, P Wijesinghe
bioRxiv, 2024.05. 21.595161, 2024
2024
Contributions of cell behavior to geometric order in embryonic cartilage
S Mathias, I Adameyko, A Hellander, J Kursawe
PLOS Computational Biology 19 (11), e1011658, 2023
2023
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Articles 1–20