Follow
James D Stephenson
James D Stephenson
Lead Data Scientist - UniProt, EMBL-EBI
Verified email at ebi.ac.uk
Title
Cited by
Cited by
Year
UniProt: the universal protein knowledgebase in 2023
Nucleic acids research 51 (D1), D523-D531, 2023
14752023
Quantifying the contribution of recessive coding variation to developmental disorders
HC Martin, WD Jones, R McIntyre, G Sanchez-Andrade, M Sanderson, ...
Science 362 (6419), 1161-1164, 2018
175*2018
VarSite: Disease variants and protein structure
RA Laskowski, JD Stephenson, I Sillitoe, CA Orengo, JM Thornton
Protein Science 29 (1), 111-119, 2020
852020
VarMap: a web tool for mapping genomic coordinates to protein sequence and structure and retrieving protein structural annotations
JD Stephenson, RA Laskowski, A Nightingale, ME Hurles, JM Thornton
Bioinformatics 35 (22), 4854-4856, 2019
442019
Three-dimensional RNA structure of the major HIV-1 packaging signal region
JD Stephenson, H Li, JC Kenyon, M Symmons, D Klenerman, AML Lever
Structure 21 (6), 951-962, 2013
402013
Characterizing 3D RNA structure by single molecule FRET
JD Stephenson, JC Kenyon, MF Symmons, AML Lever
Methods 103, 57-67, 2016
372016
Unearthing the root of amino acid similarity
JD Stephenson, SJ Freeland
Journal of molecular evolution 77 (4), 159-169, 2013
362013
Boron enrichment in martian clay
JD Stephenson, LJ Hallis, K Nagashima, SJ Freeland
PLoS One 8 (6), e64624, 2013
352013
Adaptive properties of the genetically encoded amino acid alphabet are inherited from its subsets
M Ilardo, R Bose, M Meringer, B Rasulev, N Grefenstette, J Stephenson, ...
Scientific Reports 9 (1), 12468, 2019
302019
Saturation genome editing of DDX3X clarifies pathogenicity of germline and somatic variation
EJ Radford, HK Tan, MHL Andersson, JD Stephenson, EJ Gardner, ...
Nature Communications 14 (1), 7702, 2023
202023
Evolution of ribozymes in the presence of a mineral surface
JD Stephenson, M Popović, TF Bristow, MA Ditzler
RNA 22 (12), 1893-1901, 2016
152016
EMBL’s European Bioinformatics Institute (EMBL-EBI) in 2023
M Thakur, A Buniello, C Brooksbank, KT Gurwitz, M Hall, M Hartley, ...
Nucleic Acids Research 52 (D1), D10-D17, 2024
32024
The effects of pathogenic and likely pathogenic variants for inherited hemostasis disorders in 140 214 UK Biobank participants
L Stefanucci, J Collins, MC Sims, I Barrio-Hernandez, L Sun, OS Burren, ...
Blood 142 (24), 2055-2068, 2023
32023
Mapping the Constrained Coding Regions in the human genome to their corresponding proteins
MA Hasenahuer, A Sanchis-Juan, RA Laskowski, JA Baker, ...
Journal of Molecular Biology 435 (2), 167892, 2023
12023
Secondary structure of the HIV-1 genome
J Stephenson, A Lever
HIV Therapy 3 (6), 557-563, 2009
12009
Enrichment and Clustering of Rare Genetic Variants using Shared Protein Structure Domains
JD Stephenson, RA Laskowski, JM Thornton, ME Hurles
EUROPEAN JOURNAL OF HUMAN GENETICS 27, 1717-1717, 2019
2019
Quantifying the contribution of recessive coding variation to developmental disorders
HC Martin, WD Jones, J Stephenson, J Handsaker, R McIntyre, ...
EUROPEAN JOURNAL OF HUMAN GENETICS 27, 239-240, 2019
2019
Ribozyme Evolution in an RNA-Mineral World
M Popovic, J Stephenson, P Fliss, T Bristow, M Ditzler
Astrobiology Science Conference (AbSciCon 2017), 2017
2017
Implications of Clay Mineral-RNA Interactions for the Origin of Life
JD Stephenson, MA Ditzler
AGU Fall Meeting Abstracts 2014, B31E-0073, 2014
2014
Structural analysis of the HIV-1 5'untranslated region RNA by single molecule FRET and molecular modelling
JD Stephenson
University of Cambridge, 2012
2012
The system can't perform the operation now. Try again later.
Articles 1–20