Jason Piper
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Wellington: a novel method for the accurate identification of digital genomic footprints from DNase-seq data
J Piper, MC Elze, P Cauchy, PN Cockerill, C Bonifer, S Ott
Nucleic acids research 41 (21), e201-e201, 2013
Identification of individuals by trait prediction using whole-genome sequencing data
C Lippert, R Sabatini, MC Maher, EY Kang, S Lee, O Arikan, A Harley, ...
Proceedings of the National Academy of Sciences 114 (38), 10166-10171, 2017
Identification of a dynamic core transcriptional network in t (8; 21) AML that regulates differentiation block and self-renewal
A Ptasinska, SA Assi, N Martinez-Soria, MR Imperato, J Piper, P Cauchy, ...
Cell reports 8 (6), 1974-1988, 2014
Fast and accurate HLA typing from short-read next-generation sequence data with xHLA
C Xie, ZX Yeo, M Wong, J Piper, T Long, EF Kirkness, WH Biggs, K Bloom, ...
Proceedings of the National Academy of Sciences 114 (30), 8059-8064, 2017
Inducible chromatin priming is associated with the establishment of immunological memory in T cells
SL Bevington, P Cauchy, J Piper, E Bertrand, N Lalli, RC Jarvis, ...
The EMBO journal 35 (5), 515-535, 2016
Chronic FLT3-ITD signaling in acute myeloid leukemia is connected to a specific chromatin signature
P Cauchy, SR James, J Zacarias-Cabeza, A Ptasinska, MR Imperato, ...
Cell reports 12 (5), 821-836, 2015
Wellington-bootstrap: differential DNase-seq footprinting identifies cell-type determining transcription factors
J Piper, SA Assi, P Cauchy, C Ladroue, PN Cockerill, C Bonifer, S Ott
BMC genomics 16, 1-8, 2015
Platform for visual synthesis of genomic, microbiome, and metabolome data
S Brewerton, B Coon, C Xie, R Zuniga, J De Castro, S Yooseph, W Li, ...
US Patent App. 15/348,917, 2017
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