Kimberly Siegmund
Kimberly Siegmund
Professor of Biostatistics, University of Southern California
Verified email at usc.edu
Title
Cited by
Cited by
Year
CpG island methylator phenotype underlies sporadic microsatellite instability and is tightly associated with BRAF mutation in colorectal cancer
DJ Weisenberger, KD Siegmund, M Campan, J Young, TI Long, ...
Nature genetics 38 (7), 787-793, 2006
19232006
A Big Bang model of human colorectal tumor growth
A Sottoriva, H Kang, Z Ma, TA Graham, MP Salomon, J Zhao, P Marjoram, ...
Nature genetics 47 (3), 209-216, 2015
7482015
DNA methylation in the human cerebral cortex is dynamically regulated throughout the life span and involves differentiated neurons
KD Siegmund, CM Connor, M Campan, TI Long, DJ Weisenberger, ...
PloS one 2 (9), e895, 2007
4532007
Low-level processing of Illumina Infinium DNA methylation beadarrays
TJ Triche Jr, DJ Weisenberger, D Van Den Berg, PW Laird, KD Siegmund
Nucleic acids research 41 (7), e90-e90, 2013
4482013
Genome-scale analysis of DNA methylation in lung adenocarcinoma and integration with mRNA expression
SA Selamat, BS Chung, L Girard, W Zhang, Y Zhang, M Campan, ...
Genome research 22 (7), 1197-1211, 2012
3782012
Association of breast cancer DNA methylation profiles with hormone receptor status and response to tamoxifen
M Widschwendter, KD Siegmund, HM Müller, H Fiegl, C Marth, ...
Cancer research 64 (11), 3807-3813, 2004
3732004
Recommendations for the design and analysis of epigenome-wide association studies
KB Michels, AM Binder, S Dedeurwaerder, CB Epstein, JM Greally, I Gut, ...
Nature methods 10 (10), 949, 2013
3232013
Environmental epigenetics: prospects for studying epigenetic mediation of exposure–response relationships
VK Cortessis, DC Thomas, AJ Levine, CV Breton, TM Mack, KD Siegmund, ...
Human genetics 131 (10), 1565-1589, 2012
2912012
Widespread epigenetic abnormalities suggest a broad DNA methylation erasure defect in abnormal human sperm
S Houshdaran, VK Cortessis, K Siegmund, A Yang, PW Laird, RZ Sokol
PloS one 2 (12), e1289, 2007
2902007
Hypomethylation of a LINE-1 promoter activates an alternate transcript of the MET oncogene in bladders with cancer
EM Wolff, HM Byun, HF Han, S Sharma, PW Nichols, KD Siegmund, ...
PLoS Genet 6 (4), e1000917, 2010
2842010
Epigenetic profiling of somatic tissues from human autopsy specimens identifies tissue-and individual-specific DNA methylation patterns
HM Byun, KD Siegmund, F Pan, DJ Weisenberger, G Kanel, PW Laird, ...
Human molecular genetics 18 (24), 4808-4817, 2009
2622009
Detection of methylated apoptosis-associated genes in urine sediments of bladder cancer patients
MG Friedrich, DJ Weisenberger, JC Cheng, S Chandrasoma, ...
Clinical Cancer Research 10 (22), 7457-7465, 2004
2382004
Bis-SNP: combined DNA methylation and SNP calling for Bisulfite-seq data
Y Liu, KD Siegmund, PW Laird, BP Berman
Genome biology 13 (7), 1-14, 2012
2262012
Molecular characterization of MSI-H colorectal cancer by MLHI promoter methylation, immunohistochemistry, and mismatch repair germline mutation screening
JN Poynter, KD Siegmund, DJ Weisenberger, TI Long, SN Thibodeau, ...
Cancer Epidemiology and Prevention Biomarkers 17 (11), 3208-3215, 2008
2042008
The PREMM1, 2, 6 model predicts risk of MLH1, MSH2, and MSH6 germline mutations based on cancer history
F Kastrinos, EW Steyerberg, R Mercado, J Balmaña, S Holter, S Gallinger, ...
Gastroenterology 140 (1), 73-81. e5, 2011
1812011
Unique DNA methylation patterns distinguish noninvasive and invasive urothelial cancers and establish an epigenetic field defect in premalignant tissue
EM Wolff, Y Chihara, F Pan, DJ Weisenberger, KD Siegmund, K Sugano, ...
Cancer research 70 (20), 8169-8178, 2010
1762010
The methylenetetrahydrofolate reductase 677C→ T polymorphism and distal colorectal adenoma risk
AJ Levine, KD Siegmund, CM Ervin, A Diep, ER Lee, HD Frankl, ...
Cancer Epidemiology and Prevention Biomarkers 9 (7), 657-663, 2000
1542000
Prognostic relevance of methylation markers in patients with non-muscle invasive bladder carcinoma
MG Friedrich, S Chandrasoma, KD Siegmund, DJ Weisenberger, ...
European Journal of Cancer 41 (17), 2769-2778, 2005
1502005
Inferring clonal expansion and cancer stem cell dynamics from DNA methylation patterns in colorectal cancers
KD Siegmund, P Marjoram, YJ Woo, S Tavaré, D Shibata
Proceedings of the National Academy of Sciences 106 (12), 4828-4833, 2009
1462009
Associations between smoking, alcohol consumption, and colorectal cancer, overall and by tumor microsatellite instability status
JN Poynter, RW Haile, KD Siegmund, PT Campbell, JC Figueiredo, ...
Cancer Epidemiology and Prevention Biomarkers 18 (10), 2745-2750, 2009
1432009
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