Sascha Steinbiss
Sascha Steinbiss
Unknown affiliation
Verified email at steinbiss.name - Homepage
TitleCited byYear
Fine-grained annotation and classification of de novo predicted LTR retrotransposons
S Steinbiss, U Willhoeft, G Gremme, S Kurtz
Nucleic Acids Research 37 (21), 7002-7013, 2009
1242009
GenomeTools: a comprehensive software library for efficient processing of structured genome annotations
G Gremme, S Steinbiss, S Kurtz
IEEE/ACM Transactions on Computational Biology and Bioinformatics 10 (3 …, 2013
1212013
EuPathDB: the eukaryotic pathogen genomics database resource
C Aurrecoechea, A Barreto, EY Basenko, J Brestelli, BP Brunk, S Cade, ...
Nucleic Acids Research 45 (D1), D581-D591, 2016
672016
Companion: a web server for annotation and analysis of parasite genomes
S Steinbiss, F Silva-Franco, B Brunk, B Foth, C Hertz-Fowler, M Berriman, ...
Nucleic Acids Research 44, W29-W34, 2016
422016
A new Plasmodium vivax reference sequence with improved assembly of the subtelomeres reveals an abundance of pir genes
S Auburn, U Boehme, S Steinbiss, H Trimarsanto, J Hostetler, M Sanders, ...
Wellcome Open Research 1, 4, 2016
352016
A new Plasmodium vivax reference sequence with improved assembly of the subtelomeres reveals an abundance of pir genes.
S Auburn, U Bohme, S Steinbiss, H Trimarsanto, J Hostetler, M Sanders
Wellcome Open Research 1, 4, 2016
35*2016
Community-driven development for computational biology at Sprints, Hackathons and Codefests
S Möller, E Afgan, M Banck, RJP Bonnal, T Booth, J Chilton, PJA Cock, ...
BMC Bioinformatics 15 (Suppl 14), 2014
282014
AnnotationSketch: a genome annotation drawing library
S Steinbiss, G Gremme, C Schärfer, M Mader, S Kurtz
Bioinformatics 25 (4), 533-534, 2008
282008
The genome of the sparganosis tapeworm Spirometra erinaceieuropaei isolated from the biopsy of a migrating brain lesion
HM Bennett, HP Mok, E Gkrania-Klotsas, EJ Stanley, IJ Tsai, NM Antoun, ...
Genome Biology 15 (11), 510, 2014
272014
Complete avian malaria parasite genomes reveal features associated with lineage-specific evolution in birds and mammals
U Boehme, TD Otto, J Cotton, S Steinbiss, M Sanders, SO Oyola, A Nicot, ...
Genome Research 28 (4), 547-560, 2018
252018
FISH Oracle: a web server for flexible visualization of DNA copy number data in a genomic context
M Mader, R Simon, S Steinbiss, S Kurtz
Journal of Clinical Bioinformatics 1, 20, 2011
162011
LTRsift: a graphical user interface for semi-automatic classification and postprocessing of de novo detected LTR retrotransposons
S Steinbiss, S Kastens, S Kurtz
Mobile DNA 3 (1), 18, 2012
152012
Genome organization and DNA accessibility control antigenic variation in trypanosomes
LSM Müller, RO Cosentino, KU Förstner, J Guizetti, C Wedel, N Kaplan, ...
Nature 563 (7729), 121–125, 2018
132018
A new efficient data structure for storage and retrieval of multiple biosequences
S Steinbiss, S Kurtz
IEEE/ACM Transactions on Computational Biology and Bioinformatics 9 (2), 345-357, 2012
132012
First Draft Genome Sequence of the Dourine Causative Agent: Trypanosoma Equiperdum Strain OVI
L Hébert, B Moumen, A Madeline, S Steinbiss, L Lakhdar, N Van Reet, ...
Journal of Genomics 5, 1-3, 2017
102017
An expressed, endogenous Nodavirus-like element captured by a retrotransposon in the genome of the plant parasitic nematode Bursaphelenchus xylophilus
JA Cotton, S Steinbiss, T Yokoi, IJ Tsai, T Kikuchi
Scientific Reports 6, 39749, 2016
82016
GenomeTools
G Gremme, S Steinbiss, S Kurtz
See http://genometools.org/index.html, 2011
62011
GFF3toEMBL: Preparing annotated assemblies for submission to EMBL
AJ Page, S Steinbiss, B Taylor, T Seemann, JA Keane
J. Open Source Software 1, 6, 2016
32016
khmer release v2. 1: software for biological sequence analysis.
DS Standage, A Ali yari, LJ Cohen, MR Crusoe, T Head, L Irber, ...
J. Open Source Software 2 (15), 272, 2017
22017
Multilocus Analysis Resolves the European Finch Epidemic Strain of Trichomonas gallinae and Suggests Introgression from Divergent Trichomonads
AF Alrefaei, R Low, N Hall, R Jardim, A Dávila, R Gerhold, S John, ...
Genome biology and evolution 11 (8), 2391-2402, 2019
2019
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Articles 1–20