| Integrative analysis of 111 reference human epigenomes A Kundaje, W Meuleman, J Ernst, M Bilenky, A Yen, A Heravi-Moussavi, ... Nature 518 (7539), 317-330, 2015 | 6199 | 2015 |
| Pan-cancer analysis of whole genomes Nature 578 (7793), 82-93, 2020 | 1838* | 2020 |
| Histone modification levels are predictive for gene expression R Karlić, HR Chung, J Lasserre, K Vlahoviček, M Vingron Proceedings of the National Academy of Sciences 107 (7), 2926-2931, 2010 | 921 | 2010 |
| Cell-of-origin chromatin organization shapes the mutational landscape of cancer P Polak, R Karlić, A Koren, R Thurman, R Sandstrom, MS Lawrence, ... Nature 518 (7539), 360-364, 2015 | 594 | 2015 |
| A mutational signature reveals alterations underlying deficient homologous recombination repair in breast cancer P Polak, J Kim, LZ Braunstein, R Karlic, NJ Haradhavala, G Tiao, ... Nature genetics 49 (10), 1476-1486, 2017 | 516 | 2017 |
| Genome-Wide Association Study in Asian Populations Identifies Variants in ETS1 and WDFY4 Associated with Systemic Lupus Erythematosus W Yang, N Shen, DQ Ye, Q Liu, Y Zhang, XX Qian, N Hirankarn, D Ying, ... PLoS genetics 6 (2), e1000841, 2010 | 459 | 2010 |
| Genomic characterization of biliary tract cancers identifies driver genes and predisposing mutations CP Wardell, M Fujita, T Yamada, M Simbolo, M Fassan, R Karlic, P Polak, ... Journal of hepatology 68 (5), 959-969, 2018 | 324 | 2018 |
| A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns W Jiao, G Atwal, P Polak, R Karlic, E Cuppen, A Danyi, J de Ridder, ... Nature communications 11 (1), 728, 2020 | 193 | 2020 |
| Genetic variation in human DNA replication timing A Koren, RE Handsaker, N Kamitaki, R Karlić, S Ghosh, P Polak, K Eggan, ... Cell 159 (5), 1015-1026, 2014 | 167 | 2014 |
| Long terminal repeats power evolution of genes and gene expression programs in mammalian oocytes and zygotes V Franke, S Ganesh, R Karlic, R Malik, J Pasulka, F Horvat, M Kuzman, ... Genome research 27 (8), 1384-1394, 2017 | 137 | 2017 |
| Analysis of somatic microsatellite indels identifies driver events in human tumors YE Maruvka, KW Mouw, R Karlic, P Parasuraman, A Kamburov, P Polak, ... Nature biotechnology 35 (10), 951-959, 2017 | 133 | 2017 |
| Long non-coding RNA exchange during the oocyte-to-embryo transition in mice R Karlic, S Ganesh, V Franke, E Svobodova, J Urbanova, Y Suzuki, F Aoki, ... Dna research 24 (2), 129-141, 2017 | 58 | 2017 |
| High endogenous CCL2 expression promotes the aggressive phenotype of human inflammatory breast cancer A Rogic, I Pant, L Grumolato, R Fernandez-Rodriguez, A Edwards, S Das, ... Nature communications 12 (1), 6889, 2021 | 38 | 2021 |
| PCAWG Tumor Subtypes and Clinical Translation Working Group W Jiao, G Atwal, P Polak, R Karlic, E Cuppen A deep learning system accurately classifies primary and metastatic cancers …, 2020 | 25 | 2020 |
| Tumor mutational landscape is a record of the pre-malignant state K Kübler, R Karlić, NJ Haradhvala, K Ha, J Kim, M Kuzman, W Jiao, ... BioRxiv, 517565, 2019 | 23 | 2019 |
| A deep learning system can accurately classify primary and metastatic cancers based on patterns of passenger mutations W Jiao, G Atwal, P Polak, R Karlic, E Cuppen, A Danyi, J de Ridder, ... bioRxiv, 214494, 2017 | 17* | 2017 |
| Etiologic Index — A Case-Only Measure of BRCA1/2–Associated Cancer Risk R Hughley, R Karlic, H Joshi, C Turnbull, WD Foulkes, P Polak New England Journal of Medicine 383 (3), 286-288, 2020 | 14 | 2020 |
| Adherence to Mediterranean Diet in Croatia: Lessons Learned Today for a Brighter Tomorrow M Gerić, K Matković, G Gajski, I Rumbak, P Štancl, R Karlić, M Bituh Nutrients 14 (18), 3725, 2022 | 12 | 2022 |
| The Great Majority of Homologous Recombination Repair-Deficient Tumors Are Accounted for by Established Causes P Štancl, N Hamel, KM Sigel, WD Foulkes, R Karlić, P Polak Frontiers in genetics 13, 852159, 2022 | 7 | 2022 |
| Helicobacter pylori, homologous-recombination genes, and gastric cancer WD Foulkes, P Polak, R Karlić The New England journal of medicine 389 (4), 379-380, 2023 | 6 | 2023 |
