Celine Everaert
Celine Everaert
PhD student Universiteit Gent
Verified email at ugent.be
Title
Cited by
Cited by
Year
Benchmarking of RNA-sequencing analysis workflows using whole-transcriptome RT-qPCR expression data
C Everaert, M Luypaert, JLV Maag, QX Cheng, ME Dinger, J Hellemans, ...
Scientific reports 7 (1), 1-11, 2017
952017
Long noncoding RNA expression profiling in cancer: challenges and opportunities
L Lorenzi, F Avila Cobos, A Decock, C Everaert, H Helsmoortel, S Lefever, ...
Genes, Chromosomes and Cancer 58 (4), 191-199, 2019
402019
The transcriptome of lung tumor-infiltrating dendritic cells reveals a tumor-supporting phenotype and a microRNA signature with negative impact on clinical outcome
L Pyfferoen, E Brabants, C Everaert, N De Cabooter, K Heyns, ...
Oncoimmunology 6 (1), e1253655, 2017
312017
Combined analysis of metabolomes, proteomes, and transcriptomes of hepatitis C virus–infected cells and liver to identify pathways associated with disease development
J Lupberger, T Croonenborghs, AAR Suarez, N Van Renne, F Jühling, ...
Gastroenterology 157 (2), 537-551. e9, 2019
162019
Differential gene expression analysis tools exhibit substandard performance for long non-coding RNA-sequencing data
AT Assefa, K De Paepe, C Everaert, P Mestdagh, O Thas, ...
Genome biology 19 (1), 96, 2018
162018
SMARTer single cell total RNA sequencing
K Verboom, C Everaert, N Bolduc, KJ Livak, N Yigit, D Rombaut, ...
Nucleic acids research 47 (16), e93-e93, 2019
152019
Detecting long non-coding RNA biomarkers in prostate cancer liquid biopsies: Hype or hope?
H Helsmoortel, C Everaert, N Lumen, P Ost, J Vandesompele
Non-coding RNA research 3 (2), 64-74, 2018
112018
The long noncoding RNA lncNB1 promotes tumorigenesis by interacting with ribosomal protein RPL35
PY Liu, AE Tee, G Milazzo, KM Hannan, J Maag, S Mondal, B Atmadibrata, ...
Nature communications 10 (1), 1-17, 2019
102019
Performance assessment of total RNA sequencing of human biofluids and extracellular vesicles
C Everaert, H Helsmoortel, A Decock, E Hulstaert, R Van Paemel, ...
Scientific reports 9 (1), 1-16, 2019
82019
Depletion of tRNA-halves enables effective small RNA sequencing of low-input murine serum samples
A Van Goethem, N Yigit, C Everaert, M Moreno-Smith, LM Mus, E Barbieri, ...
Scientific reports 6, 37876, 2016
72016
Zipper plot: visualizing transcriptional activity of genomic regions
FA Cobos, J Anckaert, PJ Volders, C Everaert, D Rombaut, ...
BMC bioinformatics 18 (1), 1-9, 2017
42017
Integrative analysis identifies lincRNAs up-and downstream of neuroblastoma driver genes
D Rombaut, HS Chiu, B Decaesteker, C Everaert, N Yigit, A Peltier, ...
Scientific reports 9 (1), 1-13, 2019
22019
TFutils: Data structures for transcription factor bioinformatics
BJ Stubbs, S Gopaulakrishnan, K Glass, N Pochet, C Everaert, B Raby, ...
F1000Research 8, 2019
22019
Imaging-AMARETTO: An Imaging Genomics Software Tool to Interrogate Multiomics Networks for Relevance to Radiography and Histopathology Imaging Biomarkers of Clinical Outcomes
O Gevaert, M Nabian, S Bakr, C Everaert, J Shinde, A Manukyan, ...
JCO Clinical Cancer Informatics 4, 421-435, 2020
12020
Specific myelomonocytic cells heavily infiltrate orthotopic lung tumors and display a hypoxia-driven miRNA expression signature that directs tumor-supporting functions and …
E Brabants, L Pyfferoen, C Everaert, S Tavernier, K Heyns, ...
CANCER IMMUNOLOGY RESEARCH 4 (11), 2016
12016
SPECS: a non-parametric method to identify tissue-specific molecular features for unbalanced sample groups
C Everaert, PJ Volders, A Morlion, O Thas, P Mestdagh
BMC bioinformatics 21 (1), 1-8, 2020
2020
Performance assessment of total RNA sequencing of human biofluids and extracellular vesicles
C Everaert, H Helsmoortel, A Decock, E Hulstaert, R Van Paemel, ...
CLINICAL CANCER RESEARCH 26 (11), 94-95, 2020
2020
Substantial performance differences among RNA purification kits and blood collection tubes in the Extracellular RNA Quality Control study-important considerations for liquid …
A Decock, J Anckaert, C Everaert, J Nuytens, S Kuersten, A Hendrix, ...
CLINICAL CANCER RESEARCH 26 (11), 93-94, 2020
2020
Abstract B51: Performance assessment of total RNA sequencing of human biofluids and extracellular vesicles
C Everaert, H Helsmoortel, A Decock, E Hulstaert, R Van Paemel, ...
Clinical Cancer Research 26 (11 Supplement), B51-B51, 2020
2020
Abstract B49: Substantial performance differences among RNA purification kits and blood collection tubes in the Extracellular RNA Quality Control study—important …
A Decock, J Anckaert, C Everaert, J Nuytens, S Kuersten, A Hendrix, ...
Clinical Cancer Research 26 (11 Supplement), B49-B49, 2020
2020
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