Seung Woo Cho
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Targeted genome engineering in human cells with the Cas9 RNA-guided endonuclease
SW Cho, S Kim, JM Kim, JS Kim
Nature biotechnology 31 (3), 230-232, 2013
Highly efficient RNA-guided genome editing in human cells via delivery of purified Cas9 ribonucleoproteins
S Kim, D Kim, SW Cho, J Kim, JS Kim
Genome research 24 (6), 1012-1019, 2014
Analysis of off-target effects of CRISPR/Cas-derived RNA-guided endonucleases and nickases
SW Cho, S Kim, Y Kim, J Kweon, HS Kim, S Bae, JS Kim
Genome research 24 (1), 132-141, 2014
An improved ATAC-seq protocol reduces background and enables interrogation of frozen tissues
MR Corces, AE Trevino, EG Hamilton, PG Greenside, ...
Nature methods 14 (10), 959-962, 2017
DNA-free genome editing in plants with preassembled CRISPR-Cas9 ribonucleoproteins
JW Woo, J Kim, SI Kwon, C Corvalán, SW Cho, H Kim, SG Kim, ST Kim, ...
Nature biotechnology 33 (11), 1162-1164, 2015
CRISPRi-based genome-scale identification of functional long noncoding RNA loci in human cells
SJ Liu, MA Horlbeck, SW Cho, HS Birk, M Malatesta, D He, FJ Attenello, ...
Science 355 (6320), eaah7111, 2017
The chromatin accessibility landscape of primary human cancers
MR Corces, JM Granja, S Shams, BH Louie, JA Seoane, W Zhou, ...
Science 362 (6413), eaav1898, 2018
Targeted genome editing in human cells with zinc finger nucleases constructed via modular assembly
HJ Kim, HJ Lee, H Kim, SW Cho, JS Kim
Genome research 19 (7), 1279-1288, 2009
Enhancer connectome in primary human cells identifies target genes of disease-associated DNA elements
MR Mumbach, AT Satpathy, EA Boyle, C Dai, BG Gowen, SW Cho, ...
Nature genetics 49 (11), 1602-1612, 2017
Heritable Gene Knockout in Caenorhabditis elegans by Direct Injection of Cas9–sgRNA Ribonucleoproteins
SW Cho, J Lee, D Carroll, JS Kim, J Lee
Genetics 195 (3), 1177-1180, 2013
Promoter of lncRNA gene PVT1 is a tumor-suppressor DNA boundary element
SW Cho, J Xu, R Sun, MR Mumbach, AC Carter, YG Chen, KE Yost, J Kim, ...
Cell 173 (6), 1398-1412. e22, 2018
Site-directed mutagenesis in Arabidopsis thaliana using dividing tissue-targeted RGEN of the CRISPR/Cas system to generate heritable null alleles
Y Hyun, J Kim, SW Cho, Y Choi, JS Kim, G Coupland
Planta 241 (1), 271-284, 2015
ATAC-see reveals the accessible genome by transposase-mediated imaging and sequencing
X Chen, Y Shen, W Draper, JD Buenrostro, U Litzenburger, SW Cho, ...
Nature methods 13 (12), 1013-1020, 2016
Coupled single-cell CRISPR screening and epigenomic profiling reveals causal gene regulatory networks
AJ Rubin, KR Parker, AT Satpathy, Y Qi, B Wu, AJ Ong, MR Mumbach, ...
Cell 176 (1-2), 361-376. e17, 2019
Surrogate reporter-based enrichment of cells containing RNA-guided Cas9 nuclease-induced mutations
S Ramakrishna, SW Cho, S Kim, M Song, R Gopalappa, JS Kim, H Kim
Nature communications 5 (1), 1-10, 2014
Cerebellar nuclei evolved by repeatedly duplicating a conserved cell-type set
JM Kebschull, EB Richman, N Ringach, D Friedmann, E Albarran, ...
Science 370 (6523), eabd5059, 2020
Spen links RNA-mediated endogenous retrovirus silencing and X chromosome inactivation
AC Carter, J Xu, MY Nakamoto, Y Wei, BJ Zarnegar, Q Shi, JP Broughton, ...
Elife 9, e54508, 2020
Chromatin accessibility of circulating CD8+ T cells predicts treatment response to PD-1 blockade in patients with gastric cancer
HM Shin, G Kim, S Kim, JH Sim, J Choi, M Kim, M Kwon, SK Ye, DS Lee, ...
Nature communications 12 (1), 1-11, 2021
Omni-ATAC-seq: improved ATAC-seq protocol
MR Corces, MR Mumbach, WJ Greenleaf, TJ Montine, PA Khavari, ...
CRISPRpic: fast and precise analysis for CRISPR-induced mutations via prefixed index counting
HJ Lee, HY Chang, SW Cho, HP Ji
NAR genomics and bioinformatics 2 (2), lqaa012, 2020
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